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The map label for this gene is 114330376

Identifier: 114330376

GI number: 114330376

Start: 359189

End: 359539

Strand: Reverse

Name: 114330376

Synonym: Neut_0353

Alternate gene names: NA

Gene position: 359539-359189 (Counterclockwise)

Preceding gene: 114330377

Following gene: 114330375

Centisome position: 13.51

GC content: 46.44

Gene sequence:

>351_bases
ATGTCGGATGTTTTGCGACAATTCAAGGCCAGTGTTTTTCAGGCGCTGGCACACCCAACGCGTATTGCTATTGTAGAAGC
GCTACGAGAGGGTGAGCTGTCCGCTGGCATTATTATCGATAAGTTGGCGTTAGAGCAGGCAAATGCTTCACAGCATCTCG
CTGTCTTACGCGCCAAGCAGATTGTCGCTACGCGTAAAAAAGGTAATCAGGTTTTTTATATGGTGCGTGATCCACTTCTT
ATAGAGGTTCTGGATATCATGCGCCGCTACTTTCAGACGCATATTGAGGAATCCATGATGATGTTTCAGGAGCTTGAGCA
GATAGATAAAACAGAATCCGGCGAACAATGA

Upstream 100 bases:

>100_bases
TATTTCATCCACATATAGAATTCATAGCTATATTCTTTATTGCGAATATACAAATATAATATTACACTTCCATCCTTCTA
TTTCAACAGCAGGTGTTTCA

Downstream 100 bases:

>100_bases
GTAAATACACTTCCGGCTGGAATCAATGGATGCCCAAACTTGTTGTATGCCTGCGTAACTACTCTAGGCAGGATTTTGTG
GCTGATCTGATCGCCGGGCT

Product: transcriptional regulator, ArsR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSDVLRQFKASVFQALAHPTRIAIVEALREGELSAGIIIDKLALEQANASQHLAVLRAKQIVATRKKGNQVFYMVRDPLL
IEVLDIMRRYFQTHIEESMMMFQELEQIDKTESGEQ

Sequences:

>Translated_116_residues
MSDVLRQFKASVFQALAHPTRIAIVEALREGELSAGIIIDKLALEQANASQHLAVLRAKQIVATRKKGNQVFYMVRDPLL
IEVLDIMRRYFQTHIEESMMMFQELEQIDKTESGEQ
>Mature_115_residues
SDVLRQFKASVFQALAHPTRIAIVEALREGELSAGIIIDKLALEQANASQHLAVLRAKQIVATRKKGNQVFYMVRDPLLI
EVLDIMRRYFQTHIEESMMMFQELEQIDKTESGEQ

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 13288; Mature: 13156

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVLRQFKASVFQALAHPTRIAIVEALREGELSAGIIIDKLALEQANASQHLAVLRAKQ
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
IVATRKKGNQVFYMVRDPLLIEVLDIMRRYFQTHIEESMMMFQELEQIDKTESGEQ
HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDVLRQFKASVFQALAHPTRIAIVEALREGELSAGIIIDKLALEQANASQHLAVLRAKQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
IVATRKKGNQVFYMVRDPLLIEVLDIMRRYFQTHIEESMMMFQELEQIDKTESGEQ
HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]