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The map label for this gene is copB [H]

Identifier: 114330339

GI number: 114330339

Start: 319729

End: 320544

Strand: Direct

Name: copB [H]

Synonym: Neut_0312

Alternate gene names: 114330339

Gene position: 319729-320544 (Clockwise)

Preceding gene: 114330338

Following gene: 114330341

Centisome position: 12.02

GC content: 50.0

Gene sequence:

>816_bases
GTGAAATTCTTTCTGCAACTTGGGGCTGGCATTGTTGCGATTCTGTTCTTAGGTGCGGGTAGCAGCCTGCCGGCAGCAAG
CGCAGAAATACTGTCAGACAAAGCAAAACAGACTTTGCCCAATCATCTGCTCCAATCTCGGGGTGAATATCATCATCCGA
CCCATAGTGATCAGAACTATGCGTTCCTGAGTGCTGGTGTGCTTGAATACCGTCCGGGAGAGGATGGCGGCGATTTCCGC
TGGGATATACAGGGTTGGTACGGAGGAGACTTCAACCGACTGTGGTTTAAAAGTGAAGGCGAACGAAATACGGCTTTCAA
AGCAGACCACGACATCGACATACAGCTTCTGTACGGTAGATTTATTGGGAAGTATTATGATTTTCAGATCGGTGTGCGCG
GAGAGACACAAATCTTTAAAGGGAGAGATGTGGCGCGGGCTCATGCGGTTATCGGGTTTCAAGGGCTCGCTCCGTATCGC
TACGAAGTGGAGTCTGCGCTCTTTATTAGCCAGGATGGAGATGTGTCCATGCGTTTCCAGACATCCCGCAACTTTTTGCT
GACACAGCGGTTGATCTTGCAAGGACGTATTGAGACTCATGCAGCCGTGCAAAAGGTAGAAAAGTTTACTACTGGCCAAG
GGCTCAACAATATTGAGCTGGGGTTGCGGCTGCGTTATGAAATCAGGCGAGAAATCGCACCTTATATTGGAATTTCATAC
GACCGCAGCTTTTTTAAGACGGCTGATCTTGTGCGAGAGGAAGGCGGAGATTCCAGCCAGGTTCGCTTTGTGGCCGGCGT
GCAGTTGTGGTTCTAG

Upstream 100 bases:

>100_bases
CACCTGGTCCTTGGGCCTTTCACTGCCACTTGCTCTTGCATATGGAAACAGGAATGTTTCGTGTGGTTGAGACCCTGGAT
GCAGTTCCCGGAACAGAACC

Downstream 100 bases:

>100_bases
TCATCGCAGTTTTTATTAAATACCGTCAGAAAATATCGGTTTAACCTATCCATGTACCCGCAACAGCCAAGCAGCGCAGC
TCATCATCCCCAGGCTGACC

Product: copper resistance B precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKFFLQLGAGIVAILFLGAGSSLPAASAEILSDKAKQTLPNHLLQSRGEYHHPTHSDQNYAFLSAGVLEYRPGEDGGDFR
WDIQGWYGGDFNRLWFKSEGERNTAFKADHDIDIQLLYGRFIGKYYDFQIGVRGETQIFKGRDVARAHAVIGFQGLAPYR
YEVESALFISQDGDVSMRFQTSRNFLLTQRLILQGRIETHAAVQKVEKFTTGQGLNNIELGLRLRYEIRREIAPYIGISY
DRSFFKTADLVREEGGDSSQVRFVAGVQLWF

Sequences:

>Translated_271_residues
MKFFLQLGAGIVAILFLGAGSSLPAASAEILSDKAKQTLPNHLLQSRGEYHHPTHSDQNYAFLSAGVLEYRPGEDGGDFR
WDIQGWYGGDFNRLWFKSEGERNTAFKADHDIDIQLLYGRFIGKYYDFQIGVRGETQIFKGRDVARAHAVIGFQGLAPYR
YEVESALFISQDGDVSMRFQTSRNFLLTQRLILQGRIETHAAVQKVEKFTTGQGLNNIELGLRLRYEIRREIAPYIGISY
DRSFFKTADLVREEGGDSSQVRFVAGVQLWF
>Mature_271_residues
MKFFLQLGAGIVAILFLGAGSSLPAASAEILSDKAKQTLPNHLLQSRGEYHHPTHSDQNYAFLSAGVLEYRPGEDGGDFR
WDIQGWYGGDFNRLWFKSEGERNTAFKADHDIDIQLLYGRFIGKYYDFQIGVRGETQIFKGRDVARAHAVIGFQGLAPYR
YEVESALFISQDGDVSMRFQTSRNFLLTQRLILQGRIETHAAVQKVEKFTTGQGLNNIELGLRLRYEIRREIAPYIGISY
DRSFFKTADLVREEGGDSSQVRFVAGVQLWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 30735; Mature: 30735

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFLQLGAGIVAILFLGAGSSLPAASAEILSDKAKQTLPNHLLQSRGEYHHPTHSDQNY
CEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
AFLSAGVLEYRPGEDGGDFRWDIQGWYGGDFNRLWFKSEGERNTAFKADHDIDIQLLYGR
EEEECCEEEECCCCCCCCEEEEECEEECCCCCEEEEECCCCCCCCEECCCCCEEEEEEHH
FIGKYYDFQIGVRGETQIFKGRDVARAHAVIGFQGLAPYRYEVESALFISQDGDVSMRFQ
HHCCEEEEEEECCCCCEEECCCCHHHHHHEEEECCCCCCEEEECEEEEEECCCCEEEEEE
TSRNFLLTQRLILQGRIETHAAVQKVEKFTTGQGLNNIELGLRLRYEIRREIAPYIGISY
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHCCCCCCCC
DRSFFKTADLVREEGGDSSQVRFVAGVQLWF
CCHHHHHHHHHHHCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKFFLQLGAGIVAILFLGAGSSLPAASAEILSDKAKQTLPNHLLQSRGEYHHPTHSDQNY
CEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
AFLSAGVLEYRPGEDGGDFRWDIQGWYGGDFNRLWFKSEGERNTAFKADHDIDIQLLYGR
EEEECCEEEECCCCCCCCEEEEECEEECCCCCEEEEECCCCCCCCEECCCCCEEEEEEHH
FIGKYYDFQIGVRGETQIFKGRDVARAHAVIGFQGLAPYRYEVESALFISQDGDVSMRFQ
HHCCEEEEEEECCCCCEEECCCCHHHHHHEEEECCCCCCEEEECEEEEEECCCCEEEEEE
TSRNFLLTQRLILQGRIETHAAVQKVEKFTTGQGLNNIELGLRLRYEIRREIAPYIGISY
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHCCCCCCCC
DRSFFKTADLVREEGGDSSQVRFVAGVQLWF
CCHHHHHHHHHHHCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]