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The map label for this gene is nudJ [H]

Identifier: 114330286

GI number: 114330286

Start: 272424

End: 272873

Strand: Direct

Name: nudJ [H]

Synonym: Neut_0259

Alternate gene names: 114330286

Gene position: 272424-272873 (Clockwise)

Preceding gene: 114330284

Following gene: 114330287

Centisome position: 10.24

GC content: 46.89

Gene sequence:

>450_bases
ATGATCTGGAAACCCAATGTTACAGTCGCCGCAGTTGTTGAACAGAATGGTAAATACCTGTTGGTGGAAGAAATTCCCAA
AGGAACCGAGATAAAACTCAACCAACCAGCCGGTCATCTGGAACCCGGTGAGTCCATTATTCAGGCGTGCTGTCGAGAAG
TACTGGAAGAAACTGGCCATACCTTTCAGCCTGAGGTGTTAACCGGCATTTATCATTGGACATCGGCCTCGAATGGTATC
ACCTACCTGCGCTTTACCTTCTCCGGTCAAGTTACTGCTTTTGATCACGAAAGAAAACTCGATACCGGCATCATACGGGC
AATCTGGCTCAATATAGATGAAATCCGTGCAAAACAGGCATTTCATCGCACACCGCTGGTAATGCAATGTATTGAAGACT
ACCTCACCGGGAGAAACTATCCGCTGAATATCCTGAAGTACTACGGCTGA

Upstream 100 bases:

>100_bases
TACAATATAAAATTCGGGTAAGGATAGATATGCCCAGAAGCCTGCATTTATAATTACATCTTCCAATTTTAAACAGCTTG
ATTTCACACGCCCCTGCCAT

Downstream 100 bases:

>100_bases
GAGCCAATCAGCTAACTACAAAATTCGGCACAAGGAATCATACATATGAACCGGTATGGCAACCCATGGGCTTTCTACAC
TCTTATCTAGCAAGGATAGA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MIWKPNVTVAAVVEQNGKYLLVEEIPKGTEIKLNQPAGHLEPGESIIQACCREVLEETGHTFQPEVLTGIYHWTSASNGI
TYLRFTFSGQVTAFDHERKLDTGIIRAIWLNIDEIRAKQAFHRTPLVMQCIEDYLTGRNYPLNILKYYG

Sequences:

>Translated_149_residues
MIWKPNVTVAAVVEQNGKYLLVEEIPKGTEIKLNQPAGHLEPGESIIQACCREVLEETGHTFQPEVLTGIYHWTSASNGI
TYLRFTFSGQVTAFDHERKLDTGIIRAIWLNIDEIRAKQAFHRTPLVMQCIEDYLTGRNYPLNILKYYG
>Mature_149_residues
MIWKPNVTVAAVVEQNGKYLLVEEIPKGTEIKLNQPAGHLEPGESIIQACCREVLEETGHTFQPEVLTGIYHWTSASNGI
TYLRFTFSGQVTAFDHERKLDTGIIRAIWLNIDEIRAKQAFHRTPLVMQCIEDYLTGRNYPLNILKYYG

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=144, Percent_Identity=37.5, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 16994; Mature: 16994

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWKPNVTVAAVVEQNGKYLLVEEIPKGTEIKLNQPAGHLEPGESIIQACCREVLEETGH
CCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
TFQPEVLTGIYHWTSASNGITYLRFTFSGQVTAFDHERKLDTGIIRAIWLNIDEIRAKQA
CCCCHHHHHHHHCCCCCCCEEEEEEEECCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHH
FHRTPLVMQCIEDYLTGRNYPLNILKYYG
HCCCHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MIWKPNVTVAAVVEQNGKYLLVEEIPKGTEIKLNQPAGHLEPGESIIQACCREVLEETGH
CCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
TFQPEVLTGIYHWTSASNGITYLRFTFSGQVTAFDHERKLDTGIIRAIWLNIDEIRAKQA
CCCCHHHHHHHHCCCCCCCEEEEEEEECCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHH
FHRTPLVMQCIEDYLTGRNYPLNILKYYG
HCCCHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA