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The map label for this gene is recJ [H]

Identifier: 114330162

GI number: 114330162

Start: 129382

End: 131151

Strand: Reverse

Name: recJ [H]

Synonym: Neut_0131

Alternate gene names: 114330162

Gene position: 131151-129382 (Counterclockwise)

Preceding gene: 114330163

Following gene: 114330161

Centisome position: 4.93

GC content: 49.21

Gene sequence:

>1770_bases
TTGGTCATGACTAATATTATTATCCGCAAGTTTCCCTCTCACGCATACGAAACCCTCACTGCACACGGCCTGCCATCGGT
ACTTGCACGTATTTTTGCTGCACGTGGCATAGAAAAACCGAATCAGCTCGATACAACATTTTCCCACATGGCATCATTTC
AGCAACTAAAAAATATCAGGCAAATTGCAGTTTTACTAGCCGATGCGATTGCAGCAAAAAAGCGTTTACTTGTCATTGCC
GACTACGATACAGACGGCGCAACTGCTTGTGCAGTCGCCTTGCGCGCATTAAGCCAGTTTGGTGCTGTGGTGGATTATCT
TGTACCCAATCGTTTTGAATACGGCTATGGGCTGACACCGGAAATCGTGCAGCTGGCAGCAAATTGCAATCCTCCTCCCG
CAATCCTGATTACTGTGGATAACGGCATTGCCAGCGTGGAGGGCGTTGCGGAAGCAAACCGGCTGGGCATGCAGGTATTT
ATCACTGATCATCATCTGCCTGGAGATCAACTGCCAGAGGCAGCGGTTATCGTTAATCCCAACCAGCCAGGATGTGATTT
TCCTGATAAACATATTGCCGGAGTTGGCGTAATTTTTTACGTAATGCTGGCGTTACGAGCAGAACTGCGTGAACGAGGAT
CCTTCATTGCGACAGGTAAAGAACCCAATCTGGCCAACCTGCTTGATCTGGTGGCATTGGGCACCGTTGCCGATGTGGTC
AGGCTGGAAGGAACCAACCGCATCCTGGTACAGCAAGGATTGCAGCGAATCCGCAGCGGCCATTGCTGTGCTGGTATTCA
TGCGTTGTTCAAGGTAGCTGGGCGTGATTTCAGTCGCGTCACCACTTATGAGCTGGGATTTATTCTTGCCCCCAGATTAA
ATGCTGCCGGACGGCTGGATGATATGTCACTAGGAATCGAATGTTTACTGGCCGAAGATGAATCCCGTGCCCTGCATCTG
GCCAGCGAGCTGGATGAACTGAACCGCCAGCGTCGTGAAATCGAGGCAGGCATGCAGGATGAAGCGATGAGCAAGCTGGA
AGGGGTGATAAATATGCTTGATCAGTTCGATGCGCCAGCCAATAACAGGGTGCACCCTGTTTACAGCCTGTGTTTGTACG
ATTCAGATTGGCATCAGGGTGTTATCGGCCTGATTGCATCGCGCATCAAAGACAGATTGCATCGACCGGTTATCGTGTTT
GCACAGGGAAATAATGGGGAAATCAAAGGTTCCGGCAGATCAATTCCGGGCTTGCATTTGCGCGATGCACTGGATCTGGT
TACAAAACGTCACCCAGGATTAATCGTCAAATTTGGTGGCCATGCTATGGCTGCCGGTCTGACAGTACATGCACAGCATT
TTGAACAATTTCGCGCAGTATTCGAGCAAGTTGCGCAGTCACTGCTGACGCCTGTCGATTTGATACAAGTAATTGAAACC
GATGGTGAACTGGAAGAAAGAGATCTGACTCTGGAACTGGCACAATATCTGACCAATCAAGTCTGGGGACAAGGTTTTCC
TGAACCCAGTTTCAACGGCCGCTTCCGGGTTGAAAATCAACGAATTGTAGGAGAAAAACATTTGAAACTGAAGCTGCGCA
AAGCTGGCGCCAGCCGGATATATGATGGCATTCTGTTTTTTCATACTGAACGTTTGCCAGCCGAGATTGACGCTGTCTAC
CGGGTGCAGCTGAACGAATATAACGGAAGCACTCGTATGCAGTTACTACTTGAACACTGGTTTGGATCTGGTTGCGCACA
ATATGGATGA

Upstream 100 bases:

>100_bases
TCCCGGGATTGATACTGATTTCTTGATATAGCAAAACCCACCTCCTCCAGCTTGCAAACTGTTTCTTCAAACCGGCTTAT
TGCAACCCGGTGATAACATA

Downstream 100 bases:

>100_bases
ACTATTTTTTCCTGAACATGAGCGGGTTTATCTGGTTGAATTTGCCACCAGTATGGCGATTGGCTTGCTCATCGGTCTGG
AGCGTGAACGGCATCCAGCA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MVMTNIIIRKFPSHAYETLTAHGLPSVLARIFAARGIEKPNQLDTTFSHMASFQQLKNIRQIAVLLADAIAAKKRLLVIA
DYDTDGATACAVALRALSQFGAVVDYLVPNRFEYGYGLTPEIVQLAANCNPPPAILITVDNGIASVEGVAEANRLGMQVF
ITDHHLPGDQLPEAAVIVNPNQPGCDFPDKHIAGVGVIFYVMLALRAELRERGSFIATGKEPNLANLLDLVALGTVADVV
RLEGTNRILVQQGLQRIRSGHCCAGIHALFKVAGRDFSRVTTYELGFILAPRLNAAGRLDDMSLGIECLLAEDESRALHL
ASELDELNRQRREIEAGMQDEAMSKLEGVINMLDQFDAPANNRVHPVYSLCLYDSDWHQGVIGLIASRIKDRLHRPVIVF
AQGNNGEIKGSGRSIPGLHLRDALDLVTKRHPGLIVKFGGHAMAAGLTVHAQHFEQFRAVFEQVAQSLLTPVDLIQVIET
DGELEERDLTLELAQYLTNQVWGQGFPEPSFNGRFRVENQRIVGEKHLKLKLRKAGASRIYDGILFFHTERLPAEIDAVY
RVQLNEYNGSTRMQLLLEHWFGSGCAQYG

Sequences:

>Translated_589_residues
MVMTNIIIRKFPSHAYETLTAHGLPSVLARIFAARGIEKPNQLDTTFSHMASFQQLKNIRQIAVLLADAIAAKKRLLVIA
DYDTDGATACAVALRALSQFGAVVDYLVPNRFEYGYGLTPEIVQLAANCNPPPAILITVDNGIASVEGVAEANRLGMQVF
ITDHHLPGDQLPEAAVIVNPNQPGCDFPDKHIAGVGVIFYVMLALRAELRERGSFIATGKEPNLANLLDLVALGTVADVV
RLEGTNRILVQQGLQRIRSGHCCAGIHALFKVAGRDFSRVTTYELGFILAPRLNAAGRLDDMSLGIECLLAEDESRALHL
ASELDELNRQRREIEAGMQDEAMSKLEGVINMLDQFDAPANNRVHPVYSLCLYDSDWHQGVIGLIASRIKDRLHRPVIVF
AQGNNGEIKGSGRSIPGLHLRDALDLVTKRHPGLIVKFGGHAMAAGLTVHAQHFEQFRAVFEQVAQSLLTPVDLIQVIET
DGELEERDLTLELAQYLTNQVWGQGFPEPSFNGRFRVENQRIVGEKHLKLKLRKAGASRIYDGILFFHTERLPAEIDAVY
RVQLNEYNGSTRMQLLLEHWFGSGCAQYG
>Mature_589_residues
MVMTNIIIRKFPSHAYETLTAHGLPSVLARIFAARGIEKPNQLDTTFSHMASFQQLKNIRQIAVLLADAIAAKKRLLVIA
DYDTDGATACAVALRALSQFGAVVDYLVPNRFEYGYGLTPEIVQLAANCNPPPAILITVDNGIASVEGVAEANRLGMQVF
ITDHHLPGDQLPEAAVIVNPNQPGCDFPDKHIAGVGVIFYVMLALRAELRERGSFIATGKEPNLANLLDLVALGTVADVV
RLEGTNRILVQQGLQRIRSGHCCAGIHALFKVAGRDFSRVTTYELGFILAPRLNAAGRLDDMSLGIECLLAEDESRALHL
ASELDELNRQRREIEAGMQDEAMSKLEGVINMLDQFDAPANNRVHPVYSLCLYDSDWHQGVIGLIASRIKDRLHRPVIVF
AQGNNGEIKGSGRSIPGLHLRDALDLVTKRHPGLIVKFGGHAMAAGLTVHAQHFEQFRAVFEQVAQSLLTPVDLIQVIET
DGELEERDLTLELAQYLTNQVWGQGFPEPSFNGRFRVENQRIVGEKHLKLKLRKAGASRIYDGILFFHTERLPAEIDAVY
RVQLNEYNGSTRMQLLLEHWFGSGCAQYG

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=567, Percent_Identity=46.5608465608466, Blast_Score=498, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 64981; Mature: 64981

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMTNIIIRKFPSHAYETLTAHGLPSVLARIFAARGIEKPNQLDTTFSHMASFQQLKNIR
CCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QIAVLLADAIAAKKRLLVIADYDTDGATACAVALRALSQFGAVVDYLVPNRFEYGYGLTP
HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
EIVQLAANCNPPPAILITVDNGIASVEGVAEANRLGMQVFITDHHLPGDQLPEAAVIVNP
HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEECC
NQPGCDFPDKHIAGVGVIFYVMLALRAELRERGSFIATGKEPNLANLLDLVALGTVADVV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHH
RLEGTNRILVQQGLQRIRSGHCCAGIHALFKVAGRDFSRVTTYELGFILAPRLNAAGRLD
HCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEHEECCEEEECCCCCCCCCC
DMSLGIECLLAEDESRALHLASELDELNRQRREIEAGMQDEAMSKLEGVINMLDQFDAPA
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
NNRVHPVYSLCLYDSDWHQGVIGLIASRIKDRLHRPVIVFAQGNNGEIKGSGRSIPGLHL
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCHH
RDALDLVTKRHPGLIVKFGGHAMAAGLTVHAQHFEQFRAVFEQVAQSLLTPVDLIQVIET
HHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC
DGELEERDLTLELAQYLTNQVWGQGFPEPSFNGRFRVENQRIVGEKHLKLKLRKAGASRI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEECCCHHHEEEEHHHCHHHH
YDGILFFHTERLPAEIDAVYRVQLNEYNGSTRMQLLLEHWFGSGCAQYG
HHCHHEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVMTNIIIRKFPSHAYETLTAHGLPSVLARIFAARGIEKPNQLDTTFSHMASFQQLKNIR
CCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QIAVLLADAIAAKKRLLVIADYDTDGATACAVALRALSQFGAVVDYLVPNRFEYGYGLTP
HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
EIVQLAANCNPPPAILITVDNGIASVEGVAEANRLGMQVFITDHHLPGDQLPEAAVIVNP
HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEECC
NQPGCDFPDKHIAGVGVIFYVMLALRAELRERGSFIATGKEPNLANLLDLVALGTVADVV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHH
RLEGTNRILVQQGLQRIRSGHCCAGIHALFKVAGRDFSRVTTYELGFILAPRLNAAGRLD
HCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEHEECCEEEECCCCCCCCCC
DMSLGIECLLAEDESRALHLASELDELNRQRREIEAGMQDEAMSKLEGVINMLDQFDAPA
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
NNRVHPVYSLCLYDSDWHQGVIGLIASRIKDRLHRPVIVFAQGNNGEIKGSGRSIPGLHL
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCHH
RDALDLVTKRHPGLIVKFGGHAMAAGLTVHAQHFEQFRAVFEQVAQSLLTPVDLIQVIET
HHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC
DGELEERDLTLELAQYLTNQVWGQGFPEPSFNGRFRVENQRIVGEKHLKLKLRKAGASRI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEECCCHHHEEEEHHHCHHHH
YDGILFFHTERLPAEIDAVYRVQLNEYNGSTRMQLLLEHWFGSGCAQYG
HHCHHEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]