Click here to switch to the map view.

The map label for this gene is 114330083

Identifier: 114330083

GI number: 114330083

Start: 51957

End: 52436

Strand: Reverse

Name: 114330083

Synonym: Neut_0051

Alternate gene names: NA

Gene position: 52436-51957 (Counterclockwise)

Preceding gene: 114330084

Following gene: 114330082

Centisome position: 1.97

GC content: 51.67

Gene sequence:

>480_bases
ATGGCAAAGAAAAAATTAAGCTTTGGGGTACTCGGTGTCATCATCATTGGTGCCGGGGCCGCCCTTTACAGCACGATGCA
AGAATCCGGTCCTGCATTCATTGATCCTGCGGACACGAATCTTGTAATGCAGGGCAAGGCCATCTACGCAAATAACTGCG
CATCATGTCACGGCGAATCATTAGAAGGACAGCCAGACTGGCGACAACGATTGCCCAGCGGCAGGTTGCCTGCACCACCA
CACGATAAGTCTGGCCATACTTGGCATCACCCTGACGCCATGTTGGTCGACATGGTCAAAAATGGGCTCGTTCCGGGGAA
AACCGCCCCGCCACGTTACGAAAGTGATATGCCCGCTTATGGTGAGGTCTTGACCGATGAAGAGATTGTGGCGGTCATTA
CTTATATAAAAGGTAGTTGGCCTCCAAAGGTATTGCAGGCGCAAAAGGAAGCCACGCTGCAGTATCAGCGTCAGAAATGA

Upstream 100 bases:

>100_bases
TGGATGTCTTTGAGGTTGCTGCGACGGCTCAAGACACTGTTTTATCCTAAGCACTTACTACCTACCATGTGGCACTGTCC
GAATAAACAAGCGCATTGAT

Downstream 100 bases:

>100_bases
GAAGTCCGTTTGACGGCTCTCCTATTAAAAATTCGAGCACTATTTTTTTGGAGTTGATGTAATGAAATTATGGCTAGCAG
CGATCGCGATGACGGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C; Cytochrome C Family Protein; Cytochrome C Subfamily; Cytochrome; CopJ Protein; Cytochrome C Class ICCytochrome C Class I

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAKKKLSFGVLGVIIIGAGAALYSTMQESGPAFIDPADTNLVMQGKAIYANNCASCHGESLEGQPDWRQRLPSGRLPAPP
HDKSGHTWHHPDAMLVDMVKNGLVPGKTAPPRYESDMPAYGEVLTDEEIVAVITYIKGSWPPKVLQAQKEATLQYQRQK

Sequences:

>Translated_159_residues
MAKKKLSFGVLGVIIIGAGAALYSTMQESGPAFIDPADTNLVMQGKAIYANNCASCHGESLEGQPDWRQRLPSGRLPAPP
HDKSGHTWHHPDAMLVDMVKNGLVPGKTAPPRYESDMPAYGEVLTDEEIVAVITYIKGSWPPKVLQAQKEATLQYQRQK
>Mature_158_residues
AKKKLSFGVLGVIIIGAGAALYSTMQESGPAFIDPADTNLVMQGKAIYANNCASCHGESLEGQPDWRQRLPSGRLPAPPH
DKSGHTWHHPDAMLVDMVKNGLVPGKTAPPRYESDMPAYGEVLTDEEIVAVITYIKGSWPPKVLQAQKEATLQYQRQK

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17325; Mature: 17194

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKKLSFGVLGVIIIGAGAALYSTMQESGPAFIDPADTNLVMQGKAIYANNCASCHGES
CCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCEEEECCEEECCCCCCCCCCC
LEGQPDWRQRLPSGRLPAPPHDKSGHTWHHPDAMLVDMVKNGLVPGKTAPPRYESDMPAY
CCCCCHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GEVLTDEEIVAVITYIKGSWPPKVLQAQKEATLQYQRQK
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKKKLSFGVLGVIIIGAGAALYSTMQESGPAFIDPADTNLVMQGKAIYANNCASCHGES
CCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCEEEECCEEECCCCCCCCCCC
LEGQPDWRQRLPSGRLPAPPHDKSGHTWHHPDAMLVDMVKNGLVPGKTAPPRYESDMPAY
CCCCCHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GEVLTDEEIVAVITYIKGSWPPKVLQAQKEATLQYQRQK
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA