| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
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Identifier: 114049136
GI number:
Start: 4345630
End: 4348260
Strand: Direct
Name: Not Available
Synonym: Shewmr7_3649
Alternate gene names: NA
Gene position: NA
Preceding gene: 114049135
Following gene: 114049138
Centisome position: NA
GC content: NA
Gene sequence:
>2631_bases ATGTTTAGGGATGAAGATGGAACTACCCCGCCTCGAGCTCATGAGGTTGAACGCTTAAAAAAGAGACTTAATCGCCTCAA ATATTTGGCGCATAAGTATAAGCGTGCCGAAGTCGTTCAAAATGCGTTACTCGAATTATCCCATATTGCGACTCAGGTTC CTTCCCTCGAAGAGTTCTATCTAGGTGTGCATCACCACCTAAAGCAACTGATCTCTGCCGATAATTTTTTTATTGCCACT CTCGATGTGAATAGCGGGGACATTTCGGTTCCCTTCTTCGCCGATGAAAAAGACGCCCACCCCGCCCAACTCTATCCCGA GCAATCGCTATCCACCCTGCTACAACAGGGCTTAACGGGCTATGTCTTTCGCACTGGCGAAACCGTATTGTGCGATGAGG CTAAGGTTGACGAACTGGTTCAAGCGGGCGAAATAGTCAATCTCGGCTCGCCTTGTCACCTATGGCTAGGCGTCCCCATA AAACATGAAGGCATAGTGACCGCGGTACTCGTAGTGCAAACCTATGATACCAATGTGAGTTACGGCGATATCGAGGTCGA GTTAATGACCTTTATTTGCCATCACATTGCCGGCGTGATGGAAAGGCTTAAACATCAAGAACAACTAGAACAAGCCATTC AACAACGCACCAAGGAACTCAGCCAAGCCTACGATAAACTCAAGCAAGAAGTGTACGAGCGCCGCAGAGCCGAGCGGTTG CAAAAGTCGTTATTTGAGATTGCTGAGCTTGCAAGCTCAGGCTCGGATAACCCTGACTTCTATGCCCAGCTGCATAATGT GATTCGCCATCTTATCCCCGCCAATAACTGTTATATCGCCCTGCTTAATGAAGAAGGCACTCACTTAACCTTCCCGTTTT ACGTGTCACAATTAGGTAATCAACATCCAGGTTCAAGGCCCTTGCAGGATGGGTTGACCGAGTATGTGCTTAAGCATAAG CGCCCATTATTACTCGACCAACATGATATCAATGACTTAATCACCTCTGGCGAACTTTACGCTAAAGCCCCCGCACTAAA CCACACCCAAACAATGCACCAATGGATAGGTATTCCACTGTTTATCCATGATGAAGTGCGTGGCGCCTTGACCATTTACA GCTTCAGCATGACCCAAAACTACCAAACTAAAGATTTGGAATTGCTGACTTTTGTGTCCCAGCATATCGGTGCGGCCATC GAGAAAAAGCTAACCGCAGAATCTTTGCGCCGTAGCTATGAAGAATTAGAAGAAAAAGTCGCGGCACGCACCACGGCTCT TGCCGAGTTGAATAAGGATCTTGAAAAAGAAATCCGCCAACGCCGCAATATGGAAGCCAAGCTCGTCCATGATGCCAAGC ACGATGCGCTCACAGGGTTGCCGAATCGCGCCATGTTTATGGAGCGACTCAATCAAGCCATAAAGCACGTGCGGCGCCAT ACCCTAGAGCAGTTTGCCCTGCTCTTTATCGACCTCGACCGCTTCAAGCAAATTAACGACACTATGGGACATTTAGAGGG GGATAGGTTCTTAATTGAAACCGCCACCCGCCTACGCGCCTGTATTCGCAGTAACGATACCTTAGCCAGACTCGGTGGCG ATGAATTTGTTATCCTGCTCGATAGCATTAATGGTATTAACGATGCCCGTGATGTTGCCGAGCGGGTGATTCAAAAAATC TCACTCTCCTATACCTTAGGGGCAATCGAGTTTCATTCGGGCGCCAGTATTGGCATCACCATCAGCGGCAATAAGCTAGA TACCAGTGAATCCATGCTGCGCAATGCCGACACTGCCATGTACCAAGCCAAGGCGAATGGCAAGGGCTGTTATGTCATCT TCGACGATAGCGCCTCTCAGCAAAAGATGCAGGACATTGCCTTCGAAAATGATTTTAAGCAGGCTTTACAAACCGGTGAG TTACAACTGCAGTTTTGGCCGATTGTCGATTTACTGACACTACAAACCCAAGCTTTAGAATGCCGTTTGACCTGGGAGCA TCCACAGTGGGGCACCATTCCACAGGAGATCCTCAGCCAGTTAGCCGAACAAGCGAACCTGATGGTCGAACTGGATAAGT ATACGATTAGCTTGCTGGATAAGAGCTATCATCAACTACTTGCCAACCAAGGCGATAAAGTTGAATTACACCTTATGCTG TCGAGCCAACATCTAAAGCATAAGCACGCGCTGCGTGGACTCAAAAACGCCCTAAAGCAGACTAAGCTTGCGCTGCCACA GCTATGGCTGTTTTTTAATGAAAAGGCCTTAGTGCTGGAAACAGAGAATCACATTAATGGCTTTGAGTTGTTGAAAAAGC TGGACGTGAACTTGGGGATCAGCCACTACGGCAGTGGCCACAGCTCATTAAATAGTTTGTTATTCTTACCCATCAAGGGC TTAAAGCTCGATGCCAACATCACCAAACAATTGCAGGATGAGCAACACATTAAGCTGATGTCGGCTTACCAGAAAGCGGC CTCGACCTTAGACTTACAAACCTTTGTCGACGGCCTACAATCCGTCGAGCAGATAAAAATCTTCCACGCATTAGGTTATC GCTTTGGCCAAGGCGGTGCCTTAGCCTCACCTTTTTTATTGTCAGACACCACACAACAGGTCTGTGCCTGA
Upstream 100 bases:
>100_bases TCGACGAAACACCATCGTAAATATGGCTTGGATGTTACGGTATTTCATGTTAATTATAACGTTTGGTAGACAATTAACGC AGAACTGATTAGTGAGTATC
Downstream 100 bases:
>100_bases ATGCAGTAATCACATGATGAATCTTGTGATTACTGCTTTTTAAACATATCCCTTAAATTTGAGATATGGCTGCGCCCAGT CTGCATGCGCTCCTGCTCGG
Product: diguanylate cyclase/phosphodiesterase with GAF sensor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>876_residues MFRDEDGTTPPRAHEVERLKKRLNRLKYLAHKYKRAEVVQNALLELSHIATQVPSLEEFYLGVHHHLKQLISADNFFIAT LDVNSGDISVPFFADEKDAHPAQLYPEQSLSTLLQQGLTGYVFRTGETVLCDEAKVDELVQAGEIVNLGSPCHLWLGVPI KHEGIVTAVLVVQTYDTNVSYGDIEVELMTFICHHIAGVMERLKHQEQLEQAIQQRTKELSQAYDKLKQEVYERRRAERL QKSLFEIAELASSGSDNPDFYAQLHNVIRHLIPANNCYIALLNEEGTHLTFPFYVSQLGNQHPGSRPLQDGLTEYVLKHK RPLLLDQHDINDLITSGELYAKAPALNHTQTMHQWIGIPLFIHDEVRGALTIYSFSMTQNYQTKDLELLTFVSQHIGAAI EKKLTAESLRRSYEELEEKVAARTTALAELNKDLEKEIRQRRNMEAKLVHDAKHDALTGLPNRAMFMERLNQAIKHVRRH TLEQFALLFIDLDRFKQINDTMGHLEGDRFLIETATRLRACIRSNDTLARLGGDEFVILLDSINGINDARDVAERVIQKI SLSYTLGAIEFHSGASIGITISGNKLDTSESMLRNADTAMYQAKANGKGCYVIFDDSASQQKMQDIAFENDFKQALQTGE LQLQFWPIVDLLTLQTQALECRLTWEHPQWGTIPQEILSQLAEQANLMVELDKYTISLLDKSYHQLLANQGDKVELHLML SSQHLKHKHALRGLKNALKQTKLALPQLWLFFNEKALVLETENHINGFELLKKLDVNLGISHYGSGHSSLNSLLFLPIKG LKLDANITKQLQDEQHIKLMSAYQKAASTLDLQTFVDGLQSVEQIKIFHALGYRFGQGGALASPFLLSDTTQQVCA
Sequences:
NA
Specific function: NA
COG id: COG2199
COG function: function code T; FOG: GGDEF domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA