| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
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Identifier: 114048943
GI number:
Start: 4098877
End: 4101783
Strand: Direct
Name: Not Available
Synonym: Shewmr7_3455
Alternate gene names: NA
Gene position: NA
Preceding gene: 114048939
Following gene: 114048944
Centisome position: NA
GC content: NA
Gene sequence:
>2907_bases ATGCCGTTTGCCTTAGGACAACGTTGGATAAGTGATACCGAGTCAGAGCTTGGTTTAGGAACAGTCGTACAAGTTGAAGG CCGTATGGTCACAGTGTTATTCCCTGCGACTGGTGAGAACCGTATGTTCTCGCGCAACGAAGCCCCCCTGACCCGTGTCA TATACAACCCTGGCGATACGGTTGAAAGCCATGAAGGCTGGAGCCTCTCGGTTGAAGAACTCACCGAAAAAGACGGCCTC GTCGTCTACCACGGAATCCACAGCGAAACAGGTGAAAAAGCCAGCCTGCGTGAGACCCTGTTAAACCACAACATTCGCTT TAACAAACCGCAGGATCGCCTGTTTGCCGGTCAGATTGATCGCCTCGACCGTTTCGGTATTCGTTATCAATGCCAGTTAC TGCGTCATCAACTGGCGACCTCAGATTTACTCGGCTTACAAGGTCCACGCGTCGGCCTTATCCCCCACCAGATGTGGATT GCCCATGAAGTGGGTCGCCGTTATGCGCCGCGTGTATTGTTGGCTGACGAAGTGGGTTTAGGTAAAACCATCGAAGCGGG TCTGATTATCCACCAACAACTGCTCACTGGCCGCGCCGAGCGGGTACTGATTATTGTGCCGGATACCCTGCGCCATCAGT GGTTAGTAGAGATGCTACGCCGCTTTAACCTGCGATTCTCAGTATTTGATGAAGACCGTTGTGTCGAAGCCTTTGCCGAC CATGACAATCCTTTCTACACCGAGCAGTTAGTGATTTGTTCCCTCGAATTACTGCGTAAAAAGAAACGTCTCGACCAAGC ACTCGATGCCGACTGGGATTTGCTGGTCGTCGACGAGGCTCACCACTTAGAGTGGACCGAAGAAGCCCCGAGCCGTGCCT ACCAAGTGGTTGAAGCATTGAGCGAAGTAGTGCCTGGTGTATTGTTATTAACGGCAACGCCGGATCAACTCGGCCATGAG AGCCACTTTGCGCGCCTGCGCCTACTCGACCCGGATCGTTTCTACGACTACGATGCCTTCCTCGCCGAAGAAAACAGCTA CAAAGATGTCGCCGTTGCCGCCGAAGCCTTAGCGGGCGACGCAAAATTATCCGATGCCGCCATCAACAGCCTCACCGAAT TACTCAGCGAGAAAGACATAGCGCCGAGCATTCGTTTAATTCAGGCCGAAGATATTGATAGCGAACTGCAACAAGCGGCC CGCAGCGAACTGCTGCAAGAGTTGCTCGACCGCCACGGTACAGGTCGCGTGCTGTATCGCAACAGCCGCGCCTCGGTAAA AGGTTTCCCGAAACGTATTTTCAACGCCTATCCCCATGCAATGCCTGAGCAGTATCTTACCGCTGCCCGCGTAAATGAGA TGATGGGTGGTCGTAAGACCTTAGAAGCGAAAGCGGCACAAGCCCTAAGCCCTGAAAAACTCTACCAAGAATTTGAAGAT AACAGCGCCAGTTGGTGGAAGTTCGATCCTCGCGTGGATTGGTTAATCGAGTTCTTAAAGTCGCACCGCAGCAAGAAAGT GCTGATCATCGCCAGTGGCGCCGATACCGCCCTGAGCTTAGAAGAAGCCCTGCGTACCCGTGAAGGCATCCAAGCCACAG TATTCCACGAAGGCATGTCAATCATCGAGCGCGACAAGGCAGGAGCCTACTTCGCCCAAGAAGAAGGTGGCGCCCAAGCG CTGATCTGTTCTGAAATCGGCTCCGAAGGTCGTAACTTCCAGTTCGCCAGCCACTTAGTGCTGTTCGATCTGCCATTGAA CCCAGATTTATTAGAGCAACGTATCGGCCGCTTAGACCGTATCGGGCAGCAGAACGATATCCAAATTCACCTGCCTTATC TGCAAGATACGGCGCAGGAGCGTCTACTCAACTGGTATCACCAAGGTCTGAATGCCTTCGAGCTGACCTGTCCAAGTGGC CATGTGCTGTACAGTGAATTTGCCGAAGATCTATTGAATGTTCTCGTCGGCGGGGATGAAGATGAGTTGACCAATCTGCT CAACCACACCCAAAGCCGTTACAAAGAACTGAAACACGCTATGGAGCAAGGCCGCGATAAGCTGCTGGAAATCAACTCCC ACGGTGGCGATAAGGCCAAGGCGATTGTCGAGCGTTTAGCCCAAAGCGATCAGGATACTAAGCTGATTGGTTCGGTGATC CGCTTGTGGGACATTATCGGTGTCGATCAAGAAGATAAAGGTGAGAACTCTATCATCCTGCGTCCAAGTGAACACATGAT GTTCCCAACCTATCCAGGCCTGTATGAAGATGGCGTAACCGTCACCTTCGACCGTGATACCGCACTCTCCCGTGACGATA TAGCTCTGATCACCCAAGAGCACCCGTTGGTGCAAACAGGCTTAGATCTGATCACCGGCTCTGACACAGGCACGACGAGC GTCGCGATTTTGAAAAACAAAGCCTTACCCGCGGGCACCCTGTTCTTAGAACTGATCTACATGGCGGATGCCTCGGCGCC TAAATCCAGCCAGCTATATCGTTATCTGCCACCGACGCCTATCCGCGTACTGCTGGATAAAAACGGTAACGATTTGTCCG CTAAGGTGGATTACACCAGCTTTGACAAACAGTTAAGCGCGGTTAACCGCCATATTGGTAGCAAGTTAGTCACAGCATCC CAACCGATTCTGCATCCGTTATTTGCTAAGGGCGAAGAATATGCCCAAGCCGCGGTGAACGAGTTAGTGGCGCAGGCGCG TGAGAAAATGACCAGCCAACTGACGGGCGAATTAGACCGTTTAGAGTCCTTGAAAGCGGTTAACCCGAATATCCGTGAAG AAGAGTTGGAATACTTGCGTAATCAAATGCAGGAACTAAGCACTTACCTCGACGCGAGTCAGCTACAGCTCGACGCGATT CGTATGGTACTGGTTAGCCATGTCTAA
Upstream 100 bases:
>100_bases GAATTAGGCTCTAACGGGTGAGAGGGCGATTCAAATATCTCTAGTATTGATATAACATACGCGCCCTTTGTTAGAGTCCG CCCAGAGATGAGAATTTAAG
Downstream 100 bases:
>100_bases TCCACAATGACGGTAAGCTAGAGCCTCTTTAGACTCGCTTAAGCGAATATGCAAACGCCCAGCAAATGCTGGGCGTTTTT ATTTTATCTTCACGATAAGT
Product: ATP-dependent helicase HepA
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>968_residues MPFALGQRWISDTESELGLGTVVQVEGRMVTVLFPATGENRMFSRNEAPLTRVIYNPGDTVESHEGWSLSVEELTEKDGL VVYHGIHSETGEKASLRETLLNHNIRFNKPQDRLFAGQIDRLDRFGIRYQCQLLRHQLATSDLLGLQGPRVGLIPHQMWI AHEVGRRYAPRVLLADEVGLGKTIEAGLIIHQQLLTGRAERVLIIVPDTLRHQWLVEMLRRFNLRFSVFDEDRCVEAFAD HDNPFYTEQLVICSLELLRKKKRLDQALDADWDLLVVDEAHHLEWTEEAPSRAYQVVEALSEVVPGVLLLTATPDQLGHE SHFARLRLLDPDRFYDYDAFLAEENSYKDVAVAAEALAGDAKLSDAAINSLTELLSEKDIAPSIRLIQAEDIDSELQQAA RSELLQELLDRHGTGRVLYRNSRASVKGFPKRIFNAYPHAMPEQYLTAARVNEMMGGRKTLEAKAAQALSPEKLYQEFED NSASWWKFDPRVDWLIEFLKSHRSKKVLIIASGADTALSLEEALRTREGIQATVFHEGMSIIERDKAGAYFAQEEGGAQA LICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRLDRIGQQNDIQIHLPYLQDTAQERLLNWYHQGLNAFELTCPSG HVLYSEFAEDLLNVLVGGDEDELTNLLNHTQSRYKELKHAMEQGRDKLLEINSHGGDKAKAIVERLAQSDQDTKLIGSVI RLWDIIGVDQEDKGENSIILRPSEHMMFPTYPGLYEDGVTVTFDRDTALSRDDIALITQEHPLVQTGLDLITGSDTGTTS VAILKNKALPAGTLFLELIYMADASAPKSSQLYRYLPPTPIRVLLDKNGNDLSAKVDYTSFDKQLSAVNRHIGSKLVTAS QPILHPLFAKGEEYAQAAVNELVAQAREKMTSQLTGELDRLESLKAVNPNIREEELEYLRNQMQELSTYLDASQLQLDAI RMVLVSHV
Sequences:
NA
Specific function: NA
COG id: COG0553
COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA