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Identifier: 114048838

GI number:

Start: 3963129

End: 3964604

Strand: Direct

Name: Not Available

Synonym: Shewmr7_3349

Alternate gene names: NA

Gene position: NA

Preceding gene: 114048837

Following gene: 114048839

Centisome position: NA

GC content: NA

Gene sequence:

>1476_bases
ATGAAAGCGTCACTCCAGCTCAAACTGGGTCAACAGTTAACCATGACGCCACAACTTCAACAGGCCATTCGTCTGTTGCA
ATTGTCGTCATTGGAACTGCAGCAAGAGATCCAGCAAGCCTTAGACTCTAATCCTCTTCTCGAGCTGGAAGAGGAGCAAT
TTGACGCGCCTACCGAACGTAAGCAAGATATCGCCGATACCGACTTTAGCGAAACGACGGCTCAGCCACAGGAACAAGAT
AATTCCACCGTGGACATTGCCGAGTCGTTGACCAAAGAATCCCTGCCCGAAGAACTGCCCATGGACACCACTTGGGATGA
AGTCTTTACCGCATCGCCAAACTCAGGTTCTGGTGCCAGCCGTGAAGATGATATGCCCTTTCAAGGGGAAACCAGTGAAG
GCCTGTACGAACATTTAGAATGGCAGAAAAACCTCACGCCCTTCTCTGAAACCGATTTAGCCATCGCCACCGCGATTATT
GATGCCATCGACGATCAGGGATATCTCACTCAAAGTACTGAAGATATCCTCGAGGCCATGGGCAATCCTGAGATAGAACT
GGATGAAGTCGAAGCCGTGCTAAAGCGTATTCAACACTTCGATCCAGTAGGTGTCGCCGCGAGGGATCTAAGCGAATGTC
TGCTTATCCAACTCTCCCATTTTTCGCCGGACACCCCACACCTCGAAAACGCCCGCATGTTGATCAAAGATCATTTAGAT
CTGATCGCTGCCCGCGACTTTAGATTATTAATGCGTAAGACCAAACTCAAAGAGGACGACTTAAGGGACAGCATAGCGCT
GATCCAAACCTTGAATCCTCGCCCAGGTTTACTCATCACCCCTGTTGATGAAGAATATGTCATCCCCGATGTATCGGTAT
CGAAGAAAAACGGCCGCTGGGTGGTCGAATTAAACCCTGACTGCATGCCAAAAATCAATGTTAATCAGCAATATGCAGCC
ATGGCGCGCAGCACCAAAAGCCAAGCCGATAGCCAATTTATCCGCGGGCATCTGCAAGAAGCCAAGTGGTTTATCAAAAG
CCTTGAAAGCCGTAACGAAACACTGCTCAAGGTGGCAAACTGCATAGTGCAATATCAACAGGGCTTCTTCGAATACGGTG
AAGAAGCCATGAAACCTATGGTTCTGAACGATATCGCCGAGGCGGTCGAGATGCATGAATCCACCATTTCACGGGTGACG
ACGCAAAAGTACATGCATACCCCAAAGGGACTTTTTGAACTAAAATACTTCTTCTCAAGCCACGTCGGGACTGATGATGG
CGGTGAGTGCTCATCCACGGCAATCAGAGCCTTCATAAAGAAACTGGTTGCAGCGGAAAACCAGAAAAAACCATTAAGCG
ACAGCAAGATGGCGCAACTTCTGGCAGAACAGGGAATTAACGTTGCGCGCAGAACCATTGCGAAGTACCGAGAAGCGATG
CTTATTCCCCCTTCCAATCAGCGTAAAAGTTTATAG

Upstream 100 bases:

>100_bases
CAAACAGAGCCTATTGGCCTTGAATTTTGGGTCATAGGCTCCATCAATATGATAACAAGCGACCTAAATTCACAATAATA
ACGTAGGGATCAGCGGTAAC

Downstream 100 bases:

>100_bases
CCTACAGTGGAAATCGGAGGACGTTTATATGCAAATAAACCTGAGTGGACACCATATCGAGATTACCGAATCGTTACGGG
CATATGTTGAGGAAAAGTTT

Product: RNA polymerase factor sigma-54

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>491_residues
MKASLQLKLGQQLTMTPQLQQAIRLLQLSSLELQQEIQQALDSNPLLELEEEQFDAPTERKQDIADTDFSETTAQPQEQD
NSTVDIAESLTKESLPEELPMDTTWDEVFTASPNSGSGASREDDMPFQGETSEGLYEHLEWQKNLTPFSETDLAIATAII
DAIDDQGYLTQSTEDILEAMGNPEIELDEVEAVLKRIQHFDPVGVAARDLSECLLIQLSHFSPDTPHLENARMLIKDHLD
LIAARDFRLLMRKTKLKEDDLRDSIALIQTLNPRPGLLITPVDEEYVIPDVSVSKKNGRWVVELNPDCMPKINVNQQYAA
MARSTKSQADSQFIRGHLQEAKWFIKSLESRNETLLKVANCIVQYQQGFFEYGEEAMKPMVLNDIAEAVEMHESTISRVT
TQKYMHTPKGLFELKYFFSSHVGTDDGGECSSTAIRAFIKKLVAAENQKKPLSDSKMAQLLAEQGINVARRTIAKYREAM
LIPPSNQRKSL

Sequences:
NA

Specific function: NA

COG id: COG1508

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA