| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
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Identifier: 114047707
GI number:
Start: 2623781
End: 2625910
Strand: Direct
Name: Not Available
Synonym: Shewmr7_2212
Alternate gene names: NA
Gene position: NA
Preceding gene: 114047706
Following gene: 114047708
Centisome position: NA
GC content: NA
Gene sequence:
>2130_bases TTGAATTTTCTATTATCTAACAACAGCAAACGTCGCGCTTATCGCTGGCAACAGGGATTTAGCGTACTGGCCCTCAGCAG CATTAGCACCTTTTGCACCATGGCCGCACCAACAATCACCACTCAAGCAACGGCGTTACAAGCAGTGGCGGCTAAAACCA TGCCTGAAAATCCAAATGTGGCCGAAGGCGAAATCCTGCCAGCCCATCACAATGGTGAGCAAGCAAATAAGTACAAACCA GTTATTTATCAAATTTTTACCCGACTCTATGGCAATAAAAACACCACCAATAAACCTTGGGGCACGATTAGCGAAAACGG TGTGGGTAAATTTAATGATATTGATGACACAGCGCTCAAAAGTATCAAAGACTTAGGCGTTACCCATGTGTGGTATACGG GGGTGCCCCACCACGCCTTAATTGGCGATTACAGTGCGATTGGCGTCAGTAATGATGATCCCGATGTAGTTAAGGGCCGA GCCGGTTCGCCCTATGCGGTTAAAGATTATTACAACGTAAACCCCGATTTTGCTGTCGATCCCGCAAAGCGTTTACAGGA GTTTCAAGCACTTATCGAGCGCACCCACAAGCAAGGCTTAAAGGTGATTATCGATATAGTGCCCAACCATGTGGCGCGTA ATTACCATTCCATCACTAAGCCCGAGGGCGTACGTGATTTTGGTGAAGATGATAATCAAACCCTTGAATATGCAAAGCAT AATAACTTTTACTATGTGACTGATAAAAAGCAATCCTCTGGCTTTCAAGTGCCCGATTTGCCTGATAGCCTCAAACCGTT AGGCGGTGAATCGCATCCCCTAAGTGATGGTCAATTTAAGGAAATCCCCGCCAAATGGACGGGCAACGGCTCACGCCTGG CCAAGCCGGATATGAATGACTGGTACGAAACCGTTAAAATCAATTACGGTGTCCGCCCCGATGGCAGCCATGATTTCCCT ACACTGCCGCCACGCTATGCCACACTCTGCGCCGAGCAGCACTATGCTTTTTGGCAGCAACATAGCCATGAATTACCGAA CTCTTGGATCAAGTTCAATCAAATTACCCAGTATTGGTTAGCGATGGGAGTCGATGGGTTTCGTTACGATATGGCCGAAA TGGTGCCCGTCGAGTTTTGGAGCTATTTAAATAGTCATATAAAACATAGCCATCCCGAAGCCTTTATCTTAGCAGAGGTC TACAACCCAACACTGTATCGCGACTATATTCAGCTCGGCAAAATGGACTACCTCTACGACAAGGTCGATCTTTACGACAC CCTCAAAGCCATTATGGCAGGACAAAAAAGTACCGCGCAGATCGCCGCGGATCAGGCCAAAGTGCAAGATATCGACTCGC ATATGCTGCATTTTTTAGAAAACCACGACGAACAGCGCATCGCCAATGCCGCCTTTTTAGGCGCCTTAAATGGTAACTCC TCGACAGATGGGGTAGATCCGCGCTACGCCCTGCCCGCGATGGTGGTGTCAGCAACCTTAAGTACCTCACCCACCTTGCT TTATTTCGGTCAAGAAGTGGGAGAAGCGGCGACGCAAAACCTAGGCTTTGGCCATGCGTCACGCACCAGTATTTTTGATT ATGCGGGTGTTCCCGCCCATCAGCGCTGGATGAATCAAGGTAAATTTGATGGTGGCCAATCAACCGCCGCAGAAGTTGCG CTACGTACCTATTACCAAAAATTATTGAACCTGAGCACGGGGAAAAATGCGCCCGCGCTCTTAGGGAAATATCACTCGCT AGATGCTGCCAACCGCAGCGCGGTATCGGCTGCAAAGGCTAGCAATAAGGCTAACAATAAGACAAACAATGGCAGCGCAA CGGGTTATGATGACTCAACCTTTGCCTTTGTCCGCTTTGAGGCCCATACAGCCAATAGCAAAGGTCAAAAGCTGATTATT GTCAGTAACTTTAGTCAAACCCAAGCCAAGTCATTGTCCCTTAAACTCCCCAAATCTTTGATTGCGCAATGGCAGTTAAC CGATGCAAGCTATCCGCTTAAGGATTTACTGGAAGACCATACGGCGCAGTTAATTGTCGAGCGAGGTGAAGGACAGGTTC AGTTGCAGCTTGCACCTCTCTCCTCCGCGATATTTGAACTCGTCCACTAG
Upstream 100 bases:
>100_bases TAATCACCTATAACCCATACTCAATCAAACAGCTAAGCATGCTTAGCTAACAGCGCGGCCAAACTACAGTTTGGCCGCCA AGTCAGTAAAGGAATCTAGG
Downstream 100 bases:
>100_bases CCAGCTAGCGAAGTAAGATAAAAATCATAGGTTAGCGCCAGAGTCACACTTAGTTGTGACTCTGGCTTTTTTAAAACACA CTCGCATAAACATCAGTTAA
Product: alpha amylase catalytic subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>709_residues MNFLLSNNSKRRAYRWQQGFSVLALSSISTFCTMAAPTITTQATALQAVAAKTMPENPNVAEGEILPAHHNGEQANKYKP VIYQIFTRLYGNKNTTNKPWGTISENGVGKFNDIDDTALKSIKDLGVTHVWYTGVPHHALIGDYSAIGVSNDDPDVVKGR AGSPYAVKDYYNVNPDFAVDPAKRLQEFQALIERTHKQGLKVIIDIVPNHVARNYHSITKPEGVRDFGEDDNQTLEYAKH NNFYYVTDKKQSSGFQVPDLPDSLKPLGGESHPLSDGQFKEIPAKWTGNGSRLAKPDMNDWYETVKINYGVRPDGSHDFP TLPPRYATLCAEQHYAFWQQHSHELPNSWIKFNQITQYWLAMGVDGFRYDMAEMVPVEFWSYLNSHIKHSHPEAFILAEV YNPTLYRDYIQLGKMDYLYDKVDLYDTLKAIMAGQKSTAQIAADQAKVQDIDSHMLHFLENHDEQRIANAAFLGALNGNS STDGVDPRYALPAMVVSATLSTSPTLLYFGQEVGEAATQNLGFGHASRTSIFDYAGVPAHQRWMNQGKFDGGQSTAAEVA LRTYYQKLLNLSTGKNAPALLGKYHSLDAANRSAVSAAKASNKANNKTNNGSATGYDDSTFAFVRFEAHTANSKGQKLII VSNFSQTQAKSLSLKLPKSLIAQWQLTDASYPLKDLLEDHTAQLIVERGEGQVQLQLAPLSSAIFELVH
Sequences:
NA
Specific function: NA
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA