| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
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Identifier: 114047704
GI number:
Start: 2616626
End: 2618248
Strand: Reverse
Name: Not Available
Synonym: Shewmr7_2209
Alternate gene names: NA
Gene position: NA
Preceding gene: 114047710
Following gene: 114047703
Centisome position: NA
GC content: NA
Gene sequence:
>1623_bases ATGAGTGAGTTAACTTGGTGGCGTGGAGCCGTGATCTATCAAATTTATCCACGTAGCCTTTTGGATACTAATGGTGATGG CGTTGGCGATCTGCGCGGTATTATCACCAAGTTGGACTATATTGCCAGCCTGAATGTGGATGCCATTTGGATTTCGCCGT TCTTTAAATCCCCCATGGCTGACTTTGGTTACGATATCAGTGACTATCGCGAGGTGGATCCACTGTTTGGTTCGATGCAG GATTTCGATGAGCTGATCGAAAAAGCCCATCAACGTGGCATTAAAGTCATTATCGACCAAGTGTTGAGCCATACGTCGGA TCAGCATGCTTGGTTTATCGAAAGTCGTGAGAGCCGCACCAATCCCAAGGCCGATTGGTATGTCTGGGCCGATCCTAAGG AAGATGGGACGGCGCCAAACAACTGGTTGGCGATTTTCGGCGGTTGCGCCTGGGAGTGGGAACCGCGCAGACAACAATAT TATCTGCACAACTTTTTACGCAGTCAGCCCGATATAAACTTCCATAATCCTGAAGTGCGTCAAGCCGTGTTAGATAATGT GGAGTTTTGGTTGAAGAAGGGCGTCGATGGTTTCCGCCTAGATGCTATTACCTTCTGTTATCACGATGAGCAGCTTCGGG ATAACCCTGCAAAGCCAAAAGATAAACGCCAGGGGCGTGGATTTAGTGAAGATAATCCCTACGCCTATCAGTACCATTAC TACAATAATGATCGTCCGCAAACGATTCTATTTATTGAAGAATTACGCCAGCTGATCAATCGCTATCCGGGTGCTGTGAC CTTAGGCGAAGTCTCCGCTGAGGATTCTCTCGCGGTGATGGCTGCCTATACCAAGGGTGAAGACCGCTTACATATGGCCT ACAGTTTCGAGTTGCTGACCGATGACTATAGCGCCGCTTATATTCGCCAAACCGTCGAGGCTCTGGAAGCCAGCATTGGT GATGGTTGGCCCTGCTGGGCGATTGGTAACCACGATGTGCAGCGCGTCGCCAGCCGTTGGGGGCGGGGCAAGCAAACCCA CGACATGGTGAAAATGCTTAATGCCATGCTTAGCTCACTTCGCGGCAGTGTCTGTAATTACCAAGGGGAAGAGCTCGGCT TAACCGAGGCACCAATTGAATACCATGAATTGCAGGATCCCTTCGGCAAAACCTTCTGGCCAATGTTTAAGGGCCGTGAT GGTTGCCGTACTCCTATGCCGTGGGAGCAACACGCCGATTTTAGCGGCTTTAGCCAAGTGACACCTTGGTTGCCTGTGGC GAATGCACACAGAGCACTGGCGGTCGATGTGCAGGAAGCCGATCCCGCTTCAATGCTGCAGGGCTATCGTCAGTTCCTCG CGTGGCGCAAAGGCTATCCTATCTTAATCGAAGGGGAGATTGAGTTCCTCGACGCGCCTGAGCCGTTATTGGTGTTTGTG CGAACACTGGGTGAGCAGAAACTCCTTGTGTGTTTCAATCTATTAGACACAGAAACCCAGTGGGTGCTGGATAAGCTCAG CATACAACAAGAATTGACCGGGCATGGCTTGAAAACTGCGCAAAGGGTCGCTGACACATTGACATTCTCGGCCTATGCCT GCTTTTATGCGCTGTTGAACTAG
Upstream 100 bases:
>100_bases ATACAAGCCGTAGCGCCTTTACTCCGCAGTAACATGATTGTAACTGCTCATGTGAGAGTTTTTGGGTTAGCGCGCTGAAG AATAAGGATAAAGGGGCAAT
Downstream 100 bases:
>100_bases TTTTCGACGGGCATAACACTCGTTCGGACGGGCTGCACACGTTGATTGTGACTGCCTGTCCTTGTACGAAAACGCCTAAG GGACATTCCCTTTAGATAAT
Product: alpha amylase catalytic subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>540_residues MSELTWWRGAVIYQIYPRSLLDTNGDGVGDLRGIITKLDYIASLNVDAIWISPFFKSPMADFGYDISDYREVDPLFGSMQ DFDELIEKAHQRGIKVIIDQVLSHTSDQHAWFIESRESRTNPKADWYVWADPKEDGTAPNNWLAIFGGCAWEWEPRRQQY YLHNFLRSQPDINFHNPEVRQAVLDNVEFWLKKGVDGFRLDAITFCYHDEQLRDNPAKPKDKRQGRGFSEDNPYAYQYHY YNNDRPQTILFIEELRQLINRYPGAVTLGEVSAEDSLAVMAAYTKGEDRLHMAYSFELLTDDYSAAYIRQTVEALEASIG DGWPCWAIGNHDVQRVASRWGRGKQTHDMVKMLNAMLSSLRGSVCNYQGEELGLTEAPIEYHELQDPFGKTFWPMFKGRD GCRTPMPWEQHADFSGFSQVTPWLPVANAHRALAVDVQEADPASMLQGYRQFLAWRKGYPILIEGEIEFLDAPEPLLVFV RTLGEQKLLVCFNLLDTETQWVLDKLSIQQELTGHGLKTAQRVADTLTFSAYACFYALLN
Sequences:
NA
Specific function: NA
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA