Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is 113969984

Identifier: 113969984

GI number: 113969984

Start: 1946141

End: 1946503

Strand: Direct

Name: 113969984

Synonym: Shewmr4_1644

Alternate gene names: NA

Gene position: 1946141-1946503 (Clockwise)

Preceding gene: 113969983

Following gene: 113969985

Centisome position: 41.35

GC content: 49.59

Gene sequence:

>363_bases
TTGTTAACAAAACTGCTGCTTACATTAGCCGTTATCATTATGGCGATTTTACTGCTGGCCAATCGGCGCCCCAAGCATAC
ACCTACTGCGTCGGTGAATATTCCGCCGATGCAGAGTCTGTGGCGACGCTATGGCATGCGGGGAGCATTTATTCTGTTGG
GGCTCAGCCTTTTAAGCTACAGTGTGTGGTACTGGTACGATCAACATAAAGTCGTGACTGTGACGATAGTGTCTCCAGCT
GGTGTGTTATCCGGCGTGTACAAAGCGCGCAAAGGGGATATCTCGGAGGCCAAAATGGTGACGATTGAGGGCGTACACAT
TCGCTTTTCTAATGCGGAGCGGTTGGAAATTCTCGAAGACTAA

Upstream 100 bases:

>100_bases
ATGTCGCTGCGATATTGTGTTGCATAAGCTTGATCTTAATGACAGTTTCGCATTTCAATGTCGATTATAATCGGTTAAGT
CCCGCCCTCTGGAGTGTCCC

Downstream 100 bases:

>100_bases
CACAGATTTATTTTATGAATTTATCGCTCCCGCCTTTTCATTACTAAGTTATGCGTTAAACTAGCGACAATTTTTTAGCC
TGCACTTAAGTGGACTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLTKLLLTLAVIIMAILLLANRRPKHTPTASVNIPPMQSLWRRYGMRGAFILLGLSLLSYSVWYWYDQHKVVTVTIVSPA
GVLSGVYKARKGDISEAKMVTIEGVHIRFSNAERLEILED

Sequences:

>Translated_120_residues
MLTKLLLTLAVIIMAILLLANRRPKHTPTASVNIPPMQSLWRRYGMRGAFILLGLSLLSYSVWYWYDQHKVVTVTIVSPA
GVLSGVYKARKGDISEAKMVTIEGVHIRFSNAERLEILED
>Mature_120_residues
MLTKLLLTLAVIIMAILLLANRRPKHTPTASVNIPPMQSLWRRYGMRGAFILLGLSLLSYSVWYWYDQHKVVTVTIVSPA
GVLSGVYKARKGDISEAKMVTIEGVHIRFSNAERLEILED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13524; Mature: 13524

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKLLLTLAVIIMAILLLANRRPKHTPTASVNIPPMQSLWRRYGMRGAFILLGLSLLSY
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
SVWYWYDQHKVVTVTIVSPAGVLSGVYKARKGDISEAKMVTIEGVHIRFSNAERLEILED
HHEEEECCCEEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCEEEECC
>Mature Secondary Structure
MLTKLLLTLAVIIMAILLLANRRPKHTPTASVNIPPMQSLWRRYGMRGAFILLGLSLLSY
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
SVWYWYDQHKVVTVTIVSPAGVLSGVYKARKGDISEAKMVTIEGVHIRFSNAERLEILED
HHEEEECCCEEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA