| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is yhfO [H]
Identifier: 113969870
GI number: 113969870
Start: 1804499
End: 1804963
Strand: Direct
Name: yhfO [H]
Synonym: Shewmr4_1528
Alternate gene names: 113969870
Gene position: 1804499-1804963 (Clockwise)
Preceding gene: 113969869
Following gene: 113969871
Centisome position: 38.34
GC content: 49.68
Gene sequence:
>465_bases ATGGCAAACATTATTTTTCGCGCTGACGTATCCCATAGTCATGAGGTTGCCCTGTTATTTAATGAATATCGGCAGTTTTA CGGCTGTAAGGATGATGTGCTGGCGGCTGAGCAGTTTATTCGTGCGCGTTTGCAGGATGCCTCGTCCGTGGTGTTTATGG CGCGCTCACCCGAAGGCATGGGATTAGGCTTTGTGCAGCTGTATCCCAGTTTTTCATCACTGCGTTTAGCGCCGATTTTT ATCCTAAACGATGTGTTTGTCACCCAGCATGCGCGTTGTGTCGGTGTTGGCAGGGCGTTGGTGCAACAGGCGGCTGAATA TGCCAGAGCCTTGGGCGCTTGCGCCTTAGTGCTGGAGACCCAAAAGGAGAATGTCCGCGCGCAGGGATTGTATGAAGCCT TGGGTTTTGTGCGGGATCAGAATTTTTTAACTTATGAACTTGAGATTAACTCTCTGCTTAAGTAG
Upstream 100 bases:
>100_bases ACAGCGACCGGTAGAGTAGGGCATTAAGGCTTCAAGCGGCGAAGCGTATTCGCTTGTTTGGAGTATCTAGGTGCAAATAG ATTTGAGGTTGGAAAAGCCG
Downstream 100 bases:
>100_bases TTTATGCTTAATTGCTAATGAAAAGGACAACAAGATGTTTAAAGCGTTTGCCGTTGCCGGCTTAATGTTAACTGTGAGCC ATAGCGTATTCGCCGATGAG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MANIIFRADVSHSHEVALLFNEYRQFYGCKDDVLAAEQFIRARLQDASSVVFMARSPEGMGLGFVQLYPSFSSLRLAPIF ILNDVFVTQHARCVGVGRALVQQAAEYARALGACALVLETQKENVRAQGLYEALGFVRDQNFLTYELEINSLLK
Sequences:
>Translated_154_residues MANIIFRADVSHSHEVALLFNEYRQFYGCKDDVLAAEQFIRARLQDASSVVFMARSPEGMGLGFVQLYPSFSSLRLAPIF ILNDVFVTQHARCVGVGRALVQQAAEYARALGACALVLETQKENVRAQGLYEALGFVRDQNFLTYELEINSLLK >Mature_153_residues ANIIFRADVSHSHEVALLFNEYRQFYGCKDDVLAAEQFIRARLQDASSVVFMARSPEGMGLGFVQLYPSFSSLRLAPIFI LNDVFVTQHARCVGVGRALVQQAAEYARALGACALVLETQKENVRAQGLYEALGFVRDQNFLTYELEINSLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 17240; Mature: 17109
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIIFRADVSHSHEVALLFNEYRQFYGCKDDVLAAEQFIRARLQDASSVVFMARSPEGM CCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC GLGFVQLYPSFSSLRLAPIFILNDVFVTQHARCVGVGRALVQQAAEYARALGACALVLET CEEHEEECCCCCCCEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC QKENVRAQGLYEALGFVRDQNFLTYELEINSLLK CCCCHHHHHHHHHHHHHCCCCEEEEEEEEHHHCC >Mature Secondary Structure ANIIFRADVSHSHEVALLFNEYRQFYGCKDDVLAAEQFIRARLQDASSVVFMARSPEGM CCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC GLGFVQLYPSFSSLRLAPIFILNDVFVTQHARCVGVGRALVQQAAEYARALGACALVLET CEEHEEECCCCCCCEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC QKENVRAQGLYEALGFVRDQNFLTYELEINSLLK CCCCHHHHHHHHHHHHHCCCCEEEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]