Click here to switch to the map view.

The map label for this gene is 113969843

Identifier: 113969843

GI number: 113969843

Start: 1762492

End: 1763826

Strand: Direct

Name: 113969843

Synonym: Shewmr4_1501

Alternate gene names: NA

Gene position: 1762492-1763826 (Clockwise)

Preceding gene: 113969838

Following gene: 113969844

Centisome position: 37.45

GC content: 50.86

Gene sequence:

>1335_bases
ATGAAGCAACAACAAACGGACTTGGGCAAAGATCCAAGAACTATGGTCACCCCTAAGGCATTCACTATTGCCGAATCTGT
GCTTTACACCCCGCTAGCGACGCCATTAAGGCGGGCGCTGGCGATGTTAATCGACGGTTTATTCATCACTATTTTAGCCG
AACAAATGGATTGGCTGTTTGTTCTGCTGGTGGTGGGGATTATTTATATCGAGAAACGCAGTCGCCAGTTTGGTCGCTTA
CTCAAATGGGGCCTCTACGCCGCCATGCTGGGATTAATGCTCTTTAGCTCGGCGGGAAATTTGTGGAATTTCCATCAATC
GAATCGATCCACCCGCGAGAAGGTCTCCGCGCCCCAGGATATTAACGCTGTTGTTAAGGCGATTCCTGGTCTTGTCTCCC
TCGGACTCTGTGACAATACCGATTGTGCCCGTGAACAGATCCGTGCTTTGCAGCAGACACTCGAAAATGGGCCCATGGAG
GGAATGTCGGCAGCTGAGCGCCGCGATATGGTATTAGATACTTTAGCGAGCACGGAGTTATCCGAGGCCGATAAAGCGCA
GTTACGTGATGAAATGATGGCGGGCAGACTCTGGCCCGAGGTGAAGGTGTTTGAAGTCACCCTAGACTCCACTAAGGGCT
CAGCTAAAAACTCAACCAAGGAGCCAAACACATTATCACCGCCGCCACAGCCAAGTCCGTCGCTCGCAAATCTGTCGTCC
GCTGGCAAGCTTGATGCCGTTCCCGTATCAGAACCGCGAACCGATGGATTAGCCAACGCTCAAACCGATAATCGAGCGGC
CATCGAAAACGCTCCCTTAGTTCTTGACACCAACCTCAATCCTTCGCATCAAACCGAAAGCCGCAACAGTGAAACCAATG
ATGAGGAAGAGAGTGACACCCGCAGTGTGCTGGCGTGGATCAAAGGCTTTATGAGCGATATGGGTTTAGGTTTTGGCTGG
GCCGCATTTTACTTCACTGTGTTTACCGCCAAATTTGATGGTCAGACCTTAGGTAAGAAACTCTTAGGCATCCGCGTTAT
CCAACTCGATGGCGCTAAAATCAGCCTTTGGGGGGCATTTGGCCGTTATGGTGGTTATGCGGCGGGCTTCACGACGGGCT
TACTGGGCTTTATGCAGATATTTTGGGATGCCAATCGGCAGGGGATCCAAGATAAAATATCTTCCACAGTCGTGATAGAC
TTAGCGCAAATGCATAAAAAGCAACAATTAGAGCAGCAACAGGCGCAGGCTGAACATGCATTGGCCGACGTGCCAACACA
GAATAATGCGACGTCTGCTCACCTTACAACAAGCACCCGTTCGGAGCACCTATGA

Upstream 100 bases:

>100_bases
GTTAACCTCTTGCTAACATCAATAAAAAATTACGCGTATAAAAGAATAACCACTTGATGTTTCACTTATAAAACCGCTAT
CGGAACCGGATTGCCACACT

Downstream 100 bases:

>100_bases
AACAGGTCGTTATTTCTGGCAGCGGTTTATTTACGCCGCCACACAGTATTTCAAATGAAGCTTTGGTGGAGAGCTTCAAC
GCCTATGTAGATATGTTTAA

Product: RDD domain-containing protein

Products: NA

Alternate protein names: RDD Domain Containing Protein

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKQQQTDLGKDPRTMVTPKAFTIAESVLYTPLATPLRRALAMLIDGLFITILAEQMDWLFVLLVVGIIYIEKRSRQFGRL
LKWGLYAAMLGLMLFSSAGNLWNFHQSNRSTREKVSAPQDINAVVKAIPGLVSLGLCDNTDCAREQIRALQQTLENGPME
GMSAAERRDMVLDTLASTELSEADKAQLRDEMMAGRLWPEVKVFEVTLDSTKGSAKNSTKEPNTLSPPPQPSPSLANLSS
AGKLDAVPVSEPRTDGLANAQTDNRAAIENAPLVLDTNLNPSHQTESRNSETNDEEESDTRSVLAWIKGFMSDMGLGFGW
AAFYFTVFTAKFDGQTLGKKLLGIRVIQLDGAKISLWGAFGRYGGYAAGFTTGLLGFMQIFWDANRQGIQDKISSTVVID
LAQMHKKQQLEQQQAQAEHALADVPTQNNATSAHLTTSTRSEHL

Sequences:

>Translated_444_residues
MKQQQTDLGKDPRTMVTPKAFTIAESVLYTPLATPLRRALAMLIDGLFITILAEQMDWLFVLLVVGIIYIEKRSRQFGRL
LKWGLYAAMLGLMLFSSAGNLWNFHQSNRSTREKVSAPQDINAVVKAIPGLVSLGLCDNTDCAREQIRALQQTLENGPME
GMSAAERRDMVLDTLASTELSEADKAQLRDEMMAGRLWPEVKVFEVTLDSTKGSAKNSTKEPNTLSPPPQPSPSLANLSS
AGKLDAVPVSEPRTDGLANAQTDNRAAIENAPLVLDTNLNPSHQTESRNSETNDEEESDTRSVLAWIKGFMSDMGLGFGW
AAFYFTVFTAKFDGQTLGKKLLGIRVIQLDGAKISLWGAFGRYGGYAAGFTTGLLGFMQIFWDANRQGIQDKISSTVVID
LAQMHKKQQLEQQQAQAEHALADVPTQNNATSAHLTTSTRSEHL
>Mature_444_residues
MKQQQTDLGKDPRTMVTPKAFTIAESVLYTPLATPLRRALAMLIDGLFITILAEQMDWLFVLLVVGIIYIEKRSRQFGRL
LKWGLYAAMLGLMLFSSAGNLWNFHQSNRSTREKVSAPQDINAVVKAIPGLVSLGLCDNTDCAREQIRALQQTLENGPME
GMSAAERRDMVLDTLASTELSEADKAQLRDEMMAGRLWPEVKVFEVTLDSTKGSAKNSTKEPNTLSPPPQPSPSLANLSS
AGKLDAVPVSEPRTDGLANAQTDNRAAIENAPLVLDTNLNPSHQTESRNSETNDEEESDTRSVLAWIKGFMSDMGLGFGW
AAFYFTVFTAKFDGQTLGKKLLGIRVIQLDGAKISLWGAFGRYGGYAAGFTTGLLGFMQIFWDANRQGIQDKISSTVVID
LAQMHKKQQLEQQQAQAEHALADVPTQNNATSAHLTTSTRSEHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48755; Mature: 48755

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQQTDLGKDPRTMVTPKAFTIAESVLYTPLATPLRRALAMLIDGLFITILAEQMDWLF
CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLVVGIIYIEKRSRQFGRLLKWGLYAAMLGLMLFSSAGNLWNFHQSNRSTREKVSAPQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHCCCHHHHHCCCCHH
INAVVKAIPGLVSLGLCDNTDCAREQIRALQQTLENGPMEGMSAAERRDMVLDTLASTEL
HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SEADKAQLRDEMMAGRLWPEVKVFEVTLDSTKGSAKNSTKEPNTLSPPPQPSPSLANLSS
HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
AGKLDAVPVSEPRTDGLANAQTDNRAAIENAPLVLDTNLNPSHQTESRNSETNDEEESDT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH
RSVLAWIKGFMSDMGLGFGWAAFYFTVFTAKFDGQTLGKKLLGIRVIQLDGAKISLWGAF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCEEEEEECCCEEEEEECH
GRYGGYAAGFTTGLLGFMQIFWDANRQGIQDKISSTVVIDLAQMHKKQQLEQQQAQAEHA
HHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADVPTQNNATSAHLTTSTRSEHL
HHCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MKQQQTDLGKDPRTMVTPKAFTIAESVLYTPLATPLRRALAMLIDGLFITILAEQMDWLF
CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLVVGIIYIEKRSRQFGRLLKWGLYAAMLGLMLFSSAGNLWNFHQSNRSTREKVSAPQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHCCCHHHHHCCCCHH
INAVVKAIPGLVSLGLCDNTDCAREQIRALQQTLENGPMEGMSAAERRDMVLDTLASTEL
HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SEADKAQLRDEMMAGRLWPEVKVFEVTLDSTKGSAKNSTKEPNTLSPPPQPSPSLANLSS
HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
AGKLDAVPVSEPRTDGLANAQTDNRAAIENAPLVLDTNLNPSHQTESRNSETNDEEESDT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH
RSVLAWIKGFMSDMGLGFGWAAFYFTVFTAKFDGQTLGKKLLGIRVIQLDGAKISLWGAF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCEEEEEECCCEEEEEECH
GRYGGYAAGFTTGLLGFMQIFWDANRQGIQDKISSTVVIDLAQMHKKQQLEQQQAQAEHA
HHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADVPTQNNATSAHLTTSTRSEHL
HHCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA