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The map label for this gene is mcp4 [H]

Identifier: 113969784

GI number: 113969784

Start: 1687531

End: 1688985

Strand: Direct

Name: mcp4 [H]

Synonym: Shewmr4_1442

Alternate gene names: 113969784

Gene position: 1687531-1688985 (Clockwise)

Preceding gene: 113969783

Following gene: 113969786

Centisome position: 35.86

GC content: 52.85

Gene sequence:

>1455_bases
ATGAAACAAATCCAGTTTCGCACCATTGATGCCATATTGATCAAATTCAGTCTCAACGGAAAGTTTTGGGTTGTCTGCTC
TATGGTGGCGCTGATCACCGCCGCCGTTGCACTCGTCAATTACCAACATGCCCACCGCAACCTCGAAGCCGCCTCTTTGG
CTCGGGTGCAGGCGACGGTCGATGCCTTTGCTCAAGTCGCGAATGCACAGCAGTTGACAGGGGATACGTTGTCACAGTTT
GCCCGTGACAATGGTTTAAGTGTTGTCAGTCGCCAAACTGAGGCACAGCGCCAAAGAGATAATGTGACCGCCAGTGCCAG
CGTAGGATCCAGCGGCGCACTCGAGCTGTCGCAAAATGTTGCTCAATGGGAAAGCGAGGGGCGCAGCGATGCCAACTTAA
TGTTTTGGCTCGCGTTAATCGGTTTATTGCCCTTATTCCAACTCAGCTACTGGATTTCAACCTCCCTCGGTGGTGGCCTG
TGGGATATGTACATGGCCATCAAACGCTTAGCCGATGGTGACTTAAGTTTCAGATTAAACTTTTTCGGCACCGATGACTT
CAGTTTAATCGCCCGCGAAATTGACCGCTGCGCCGATAACATGAGTGAAATGGTAAGTGCTATCCGCAGCAATGCCCAGA
CGCTCTCCCTCGCCGCCGACGAGTTTAATCAGCAGGCCAAAAGCAGTGGCGAGTTAATTGGTGCCCAGCATCAATTTTTA
GACTCTGTGGCCGTTGCCATGGCGCAGATGACCTCGGCGATTGAAGAAGTATCGGTCAATGCCAGTAATACCTCGCTCCA
GACCAAAGATAACGCCAGCCAAATGAGTGCCAGCCAAGGGCGTATTAGCCACACGGTGGATAGTATTGGGCAACTCTCAA
CCAAGATTGGCGCGGCATTTTCATCGGTAGAACAGTTATCTAAGGATGCGGCGGGTATCGATGCCGTGGTGACGACCATC
AACAGTATTTCTGAGCAGACCAATTTGCTGGCGCTGAATGCGGCCATCGAAGCAGCCCGTGCGGGTGAGCAAGGTCGCGG
TTTTGCGGTGGTTGCCGATGAAGTGCGTACCTTAGCGGGACGTACTCAACAAGCCACTGTCGAGATCCAAGCGATGATCG
AAGGATTGCAATCGGGCACTCGTCAGTTATCCAATATCACTACCGAGATTGTGGATCGCGCCGATGAAGGTCGCAGCGCC
ATTATTGCCGTGGGCGACGATGTCGAGGGGATGGCGCAATCGGTTAATGCCGTATTCGATATGAGCAGCCAGATTGCTGC
ATCGGCGGAAGAGCAGAGCGTTGCCGCCCGTGATATCGCTGGCCAGCTCAATGAGATCCGCCATCAATCCGATACCATTA
AACAAACGGCGCAGCGCAGTGTCACCCTAGCGCATGATTTGCAACATGCCTCGGTTGAACTCGAAGGGATCCTTAAACAG
TACCGCACTAGCTAA

Upstream 100 bases:

>100_bases
ATGTGCAGATGATGCCTGTGCGCTAAAAAAAGTGATGGAATATATGAGCTATAATGCTGATTTAGTACCCGATAGCCTTT
AGGTCTTAGGAAATATCAAG

Downstream 100 bases:

>100_bases
TCTTACCTTCAATGTGGGCATTGCCAGTTTTCAGTGTGGGTAGTTGAGCAATAACACCCGATACTGAGTCTCATACAAAG
CATTAGCGTATCATCTGAAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MKQIQFRTIDAILIKFSLNGKFWVVCSMVALITAAVALVNYQHAHRNLEAASLARVQATVDAFAQVANAQQLTGDTLSQF
ARDNGLSVVSRQTEAQRQRDNVTASASVGSSGALELSQNVAQWESEGRSDANLMFWLALIGLLPLFQLSYWISTSLGGGL
WDMYMAIKRLADGDLSFRLNFFGTDDFSLIAREIDRCADNMSEMVSAIRSNAQTLSLAADEFNQQAKSSGELIGAQHQFL
DSVAVAMAQMTSAIEEVSVNASNTSLQTKDNASQMSASQGRISHTVDSIGQLSTKIGAAFSSVEQLSKDAAGIDAVVTTI
NSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQQATVEIQAMIEGLQSGTRQLSNITTEIVDRADEGRSA
IIAVGDDVEGMAQSVNAVFDMSSQIAASAEEQSVAARDIAGQLNEIRHQSDTIKQTAQRSVTLAHDLQHASVELEGILKQ
YRTS

Sequences:

>Translated_484_residues
MKQIQFRTIDAILIKFSLNGKFWVVCSMVALITAAVALVNYQHAHRNLEAASLARVQATVDAFAQVANAQQLTGDTLSQF
ARDNGLSVVSRQTEAQRQRDNVTASASVGSSGALELSQNVAQWESEGRSDANLMFWLALIGLLPLFQLSYWISTSLGGGL
WDMYMAIKRLADGDLSFRLNFFGTDDFSLIAREIDRCADNMSEMVSAIRSNAQTLSLAADEFNQQAKSSGELIGAQHQFL
DSVAVAMAQMTSAIEEVSVNASNTSLQTKDNASQMSASQGRISHTVDSIGQLSTKIGAAFSSVEQLSKDAAGIDAVVTTI
NSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQQATVEIQAMIEGLQSGTRQLSNITTEIVDRADEGRSA
IIAVGDDVEGMAQSVNAVFDMSSQIAASAEEQSVAARDIAGQLNEIRHQSDTIKQTAQRSVTLAHDLQHASVELEGILKQ
YRTS
>Mature_484_residues
MKQIQFRTIDAILIKFSLNGKFWVVCSMVALITAAVALVNYQHAHRNLEAASLARVQATVDAFAQVANAQQLTGDTLSQF
ARDNGLSVVSRQTEAQRQRDNVTASASVGSSGALELSQNVAQWESEGRSDANLMFWLALIGLLPLFQLSYWISTSLGGGL
WDMYMAIKRLADGDLSFRLNFFGTDDFSLIAREIDRCADNMSEMVSAIRSNAQTLSLAADEFNQQAKSSGELIGAQHQFL
DSVAVAMAQMTSAIEEVSVNASNTSLQTKDNASQMSASQGRISHTVDSIGQLSTKIGAAFSSVEQLSKDAAGIDAVVTTI
NSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQQATVEIQAMIEGLQSGTRQLSNITTEIVDRADEGRSA
IIAVGDDVEGMAQSVNAVFDMSSQIAASAEEQSVAARDIAGQLNEIRHQSDTIKQTAQRSVTLAHDLQHASVELEGILKQ
YRTS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=341, Percent_Identity=29.0322580645161, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1788195, Length=300, Percent_Identity=29.3333333333333, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI2367378, Length=304, Percent_Identity=28.9473684210526, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI1788194, Length=339, Percent_Identity=28.9085545722714, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=27.7372262773723, Blast_Score=93, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 51891; Mature: 51891

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIQFRTIDAILIKFSLNGKFWVVCSMVALITAAVALVNYQHAHRNLEAASLARVQATV
CCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DAFAQVANAQQLTGDTLSQFARDNGLSVVSRQTEAQRQRDNVTASASVGSSGALELSQNV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHH
AQWESEGRSDANLMFWLALIGLLPLFQLSYWISTSLGGGLWDMYMAIKRLADGDLSFRLN
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEE
FFGTDDFSLIAREIDRCADNMSEMVSAIRSNAQTLSLAADEFNQQAKSSGELIGAQHQFL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHCCCCEECHHHHHH
DSVAVAMAQMTSAIEEVSVNASNTSLQTKDNASQMSASQGRISHTVDSIGQLSTKIGAAF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SSVEQLSKDAAGIDAVVTTINSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHC
RTQQATVEIQAMIEGLQSGTRQLSNITTEIVDRADEGRSAIIAVGDDVEGMAQSVNAVFD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
MSSQIAASAEEQSVAARDIAGQLNEIRHQSDTIKQTAQRSVTLAHDLQHASVELEGILKQ
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRTS
HCCC
>Mature Secondary Structure
MKQIQFRTIDAILIKFSLNGKFWVVCSMVALITAAVALVNYQHAHRNLEAASLARVQATV
CCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DAFAQVANAQQLTGDTLSQFARDNGLSVVSRQTEAQRQRDNVTASASVGSSGALELSQNV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHH
AQWESEGRSDANLMFWLALIGLLPLFQLSYWISTSLGGGLWDMYMAIKRLADGDLSFRLN
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEE
FFGTDDFSLIAREIDRCADNMSEMVSAIRSNAQTLSLAADEFNQQAKSSGELIGAQHQFL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHCCCCEECHHHHHH
DSVAVAMAQMTSAIEEVSVNASNTSLQTKDNASQMSASQGRISHTVDSIGQLSTKIGAAF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SSVEQLSKDAAGIDAVVTTINSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHC
RTQQATVEIQAMIEGLQSGTRQLSNITTEIVDRADEGRSAIIAVGDDVEGMAQSVNAVFD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
MSSQIAASAEEQSVAARDIAGQLNEIRHQSDTIKQTAQRSVTLAHDLQHASVELEGILKQ
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRTS
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]