| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is glmM2 [H]
Identifier: 113969676
GI number: 113969676
Start: 1545415
End: 1546767
Strand: Direct
Name: glmM2 [H]
Synonym: Shewmr4_1333
Alternate gene names: 113969676
Gene position: 1545415-1546767 (Clockwise)
Preceding gene: 113969675
Following gene: 113969679
Centisome position: 32.84
GC content: 45.23
Gene sequence:
>1353_bases ATGTCTAGGAAGTATTTTGGTACCGATGGTGTGCGCGGCAAGGTAGGGACATTTCCTATTACTCCTGACTTTGCGATGAG GTTAGGTTGGGCGGCTGGGACGGTACTTGCATCTACTGGCACGAAAGAAGTGTTGATTGGTAAAGATACCCGAATTAGCG GTTATATGCTGGAATCCGCAATGGAAGCGGGTTTTTCTGCTGCTGGTGTAAATGTGGCTTTGATTGGCCCGATGCCAACG CCTGCTGTGGCGTATTTAGCTTCAACCTTTAGAGCTGACGCTGGCGTGGTGATCAGTGCTTCCCATAACCCTTTTTATGA TAACGGTATTAAGTTTTTTTCAAACACAGGTACCAAGCTAAATGATGCACAAGAGCTTGAAATTGAAGCGCTGTTAGAAC AAGCGCTGGAGCATAATGCGTTGCAATGTGTTGCTTCTGAAAAGCTAGGCAAAGTGCGCCGTATTGATGATGCTGCGGGT CGTTATATTGAGTTTTGTAAGGGAACCTTCCCTAATCATTTAAGCCTGGCGGGATTAAAGATTGTTGTCGATAGTGCTCA TGGCGCTGCCTACCATATTGCACCGAACGTTTACCGTGAGTTAGGGGCTGAGGTGATCAGTATTAATGACAAACCCAACG GCGTGAACATTAACGATCATTGCGGTGCGACACATTTAGATAGCTTGCAATCTGCGGTGATGATCCACGAAGCGGATTTA GGTATTGCGCTCGATGGTGATGCCGACCGAGTGATGTTTGTTGACCATAATGGTCATGTGGTTGATGGCGATGAGATTTT GTTTATTTTGGCGCAAGCGGCTTATCAAAAAGGTGAGATGCAGGGCGGGGTAGTTGGCACGTTAATGTCAAACCTTGGTT TAGAACTGGCACTCAAAGGAATGGATATACCCTTTGTGCGAGCTAAAGTTGGTGACCGCTATGTTGTTGAACAACTCAAA GAAACAGGTTGGCAGTTGGGTGGTGAAGGTTCTGGCCATATTTTGAGTTTAAAACATGCTTCTACTGGGGATGGTATAGT GGCTTCTTTACAGGTACTTAAAGCCGTTCTAGAGTCAGGCAAACGTTTAGCTGAACTAAAAGCGGAGATGACTAAATTAC CACAGGTGCTTATCAATGTACGTTTAACATCGGGTTGCGCAGATAGTATTTTAAGCAAAGACAGTGTTAAACAGGCAGTG ATAGCCGCTGAAGAAGTATTAGGAAATCAAGGTCGTGTATTGCTACGAAAATCAGGAACAGAGCCTTTAATCCGAGTGAT GGTGGAGTCAACGGATATTAGCTTGACTCAACAACAAGCTGAATATATCGCTCAGGCCGTTAAAGTGGCATAG
Upstream 100 bases:
>100_bases ACTTTTGACTTGGTTTAGAAAAGAATAATTGTAAGACTATTTTTGCAAAAGCCAGCTAACTTAAGCTGGCTTTTTGTTTT AATTTGATTAGGGATTTCAT
Downstream 100 bases:
>100_bases GCGAGGAGATAGAATCTAGGGCGTTGCTTCGCAACTGTTAGGATGCAGCCAAAAGGGCTGCAGCTAGAGGTGTTGCAAGA AGTGCTGTTTTAGGCTCTAG
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSRKYFGTDGVRGKVGTFPITPDFAMRLGWAAGTVLASTGTKEVLIGKDTRISGYMLESAMEAGFSAAGVNVALIGPMPT PAVAYLASTFRADAGVVISASHNPFYDNGIKFFSNTGTKLNDAQELEIEALLEQALEHNALQCVASEKLGKVRRIDDAAG RYIEFCKGTFPNHLSLAGLKIVVDSAHGAAYHIAPNVYRELGAEVISINDKPNGVNINDHCGATHLDSLQSAVMIHEADL GIALDGDADRVMFVDHNGHVVDGDEILFILAQAAYQKGEMQGGVVGTLMSNLGLELALKGMDIPFVRAKVGDRYVVEQLK ETGWQLGGEGSGHILSLKHASTGDGIVASLQVLKAVLESGKRLAELKAEMTKLPQVLINVRLTSGCADSILSKDSVKQAV IAAEEVLGNQGRVLLRKSGTEPLIRVMVESTDISLTQQQAEYIAQAVKVA
Sequences:
>Translated_450_residues MSRKYFGTDGVRGKVGTFPITPDFAMRLGWAAGTVLASTGTKEVLIGKDTRISGYMLESAMEAGFSAAGVNVALIGPMPT PAVAYLASTFRADAGVVISASHNPFYDNGIKFFSNTGTKLNDAQELEIEALLEQALEHNALQCVASEKLGKVRRIDDAAG RYIEFCKGTFPNHLSLAGLKIVVDSAHGAAYHIAPNVYRELGAEVISINDKPNGVNINDHCGATHLDSLQSAVMIHEADL GIALDGDADRVMFVDHNGHVVDGDEILFILAQAAYQKGEMQGGVVGTLMSNLGLELALKGMDIPFVRAKVGDRYVVEQLK ETGWQLGGEGSGHILSLKHASTGDGIVASLQVLKAVLESGKRLAELKAEMTKLPQVLINVRLTSGCADSILSKDSVKQAV IAAEEVLGNQGRVLLRKSGTEPLIRVMVESTDISLTQQQAEYIAQAVKVA >Mature_449_residues SRKYFGTDGVRGKVGTFPITPDFAMRLGWAAGTVLASTGTKEVLIGKDTRISGYMLESAMEAGFSAAGVNVALIGPMPTP AVAYLASTFRADAGVVISASHNPFYDNGIKFFSNTGTKLNDAQELEIEALLEQALEHNALQCVASEKLGKVRRIDDAAGR YIEFCKGTFPNHLSLAGLKIVVDSAHGAAYHIAPNVYRELGAEVISINDKPNGVNINDHCGATHLDSLQSAVMIHEADLG IALDGDADRVMFVDHNGHVVDGDEILFILAQAAYQKGEMQGGVVGTLMSNLGLELALKGMDIPFVRAKVGDRYVVEQLKE TGWQLGGEGSGHILSLKHASTGDGIVASLQVLKAVLESGKRLAELKAEMTKLPQVLINVRLTSGCADSILSKDSVKQAVI AAEEVLGNQGRVLLRKSGTEPLIRVMVESTDISLTQQQAEYIAQAVKVA
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=447, Percent_Identity=62.1923937360179, Blast_Score=543, Evalue=1e-156, Organism=Escherichia coli, GI1788361, Length=465, Percent_Identity=28.1720430107527, Blast_Score=129, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 47869; Mature: 47738
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKYFGTDGVRGKVGTFPITPDFAMRLGWAAGTVLASTGTKEVLIGKDTRISGYMLESA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEECCCCCEEEEECCCCCHHHHHHHH MEAGFSAAGVNVALIGPMPTPAVAYLASTFRADAGVVISASHNPFYDNGIKFFSNTGTKL HHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECCCCCC NDAQELEIEALLEQALEHNALQCVASEKLGKVRRIDDAAGRYIEFCKGTFPNHLSLAGLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECEEE IVVDSAHGAAYHIAPNVYRELGAEVISINDKPNGVNINDHCGATHLDSLQSAVMIHEADL EEEECCCCCEEEECHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHEEEECCC GIALDGDADRVMFVDHNGHVVDGDEILFILAQAAYQKGEMQGGVVGTLMSNLGLELALKG CEEECCCCCEEEEEECCCEEECCCCEEHHEEHHHHHCCCCCCCHHHHHHHHCCCEEEEEC MDIPFVRAKVGDRYVVEQLKETGWQLGGEGSGHILSLKHASTGDGIVASLQVLKAVLESG CCCCEEEHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC KRLAELKAEMTKLPQVLINVRLTSGCADSILSKDSVKQAVIAAEEVLGNQGRVLLRKSGT HHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCC EPLIRVMVESTDISLTQQQAEYIAQAVKVA CCEEEEEEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SRKYFGTDGVRGKVGTFPITPDFAMRLGWAAGTVLASTGTKEVLIGKDTRISGYMLESA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEECCCCCEEEEECCCCCHHHHHHHH MEAGFSAAGVNVALIGPMPTPAVAYLASTFRADAGVVISASHNPFYDNGIKFFSNTGTKL HHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECCCCCC NDAQELEIEALLEQALEHNALQCVASEKLGKVRRIDDAAGRYIEFCKGTFPNHLSLAGLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECEEE IVVDSAHGAAYHIAPNVYRELGAEVISINDKPNGVNINDHCGATHLDSLQSAVMIHEADL EEEECCCCCEEEECHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHEEEECCC GIALDGDADRVMFVDHNGHVVDGDEILFILAQAAYQKGEMQGGVVGTLMSNLGLELALKG CEEECCCCCEEEEEECCCEEECCCCEEHHEEHHHHHCCCCCCCHHHHHHHHCCCEEEEEC MDIPFVRAKVGDRYVVEQLKETGWQLGGEGSGHILSLKHASTGDGIVASLQVLKAVLESG CCCCEEEHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC KRLAELKAEMTKLPQVLINVRLTSGCADSILSKDSVKQAVIAAEEVLGNQGRVLLRKSGT HHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCC EPLIRVMVESTDISLTQQQAEYIAQAVKVA CCEEEEEEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA