| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969649
Identifier: 113969649
GI number: 113969649
Start: 1513243
End: 1514250
Strand: Direct
Name: 113969649
Synonym: Shewmr4_1306
Alternate gene names: NA
Gene position: 1513243-1514250 (Clockwise)
Preceding gene: 113969648
Following gene: 113969650
Centisome position: 32.15
GC content: 45.54
Gene sequence:
>1008_bases ATGTCAAAATCGGTTGATGAAACTGTTTTTGATTTTTTTGAATTATTGTTGCATGAAGAAGACAGTAAAGCTGTAGCTTC CCCAAATGCACCTCGAAATGAGGCTGCGGTTTCCTTGGCAGGGAAAAAAAATGAAGCACAATTGCTCGATGACGCCATTT TAGCCGAGCGCAGTCAGGCTAAAGCGCACGCTAGCGTGACAATCGCCGCCGAAGTGCAGCCGCAGAAGGCAAAGTCTGCC AGCAATATGTCTCATCTTGATGAGCCAGCACCGTTAGTTAATAAGCAGGCTTTGGAAAAACTCCTTGCGCCAGTATTAAA GACGGTTGAGGACAAGCCAGCTGAGGCCATGGCCGAGGTTGCACCTGAAGTGGTTCAAGTTCAAGAGGTGGCTCATGACG AGAATATTTCGTCTGGCGCAACGCAAAACGATGCCAATGTCACATTTGAGCAACCATCGGCAGTGGTGGAAAGCGAGATT GACATTGAGACAACACCCGAGACTCAGGTGGGGTTTGCCCCTCCAAGTATCACAAAAGACCTGCAAGAAGTACTCGATGA TGAGTTTCAAGTACTATTCTTTAAAGTGGCTGGGTTAACCTTAGCTGTGCCTTTAGTGAGTCTTGGTGGGATAGTTAAGG TTGAGCGAATTAATCATATTATCGGTCGCCCTTCATGGTTTTTAGGGGTGCAAACCCATAGGGAAGAGCAGTTAAATCTG GTTGATACCTGTGCATGGGTGATGCCAGAAAAATACACGGATAAACTGGCGCAATCGGTAAATTATCAATATCTTGTATT ATTAGAAGGCAGTAATTGGGGATTAGCTTGTGAGTCCCTCGTTAATGCAGTAAAAATTAATAAATCGCAAGTAAACTGGC GCAGCAAAGCGGGGAAACGTCCTTGGTTAGCTGGTGTAGTGAAAGAACAAATGTGTGGCATTTTGCACGTACAAGCCTTA GTTGAAATGCTTGATGCGGGTTTAGGCTGTCAGGACTCCATTGGTTGA
Upstream 100 bases:
>100_bases AGTTTGGCACATTTACCCGCTTCCCATTATGCAAGCGGCAGTCGTGGCGTAAAAGCTTACGAGCGATTATTGGATTTTCT TTTAGCTGGGGAGTTTGGCC
Downstream 100 bases:
>100_bases GGTAAACATGAAAGATACAAGAAATGTCGCGGCCGTGGCTGCAAGTAAAGATGATGCAGTATTGCAATGGGTTACCTTTA AGTTAGACAACGAAACTTAT
Product: CheW protein
Products: NA
Alternate protein names: CheW Domain-Containing Protein; CheW-Like Protein; CheW Domain Protein; CheW-Like Domain-Containing Protein; Chemotaxis Coupling Protein; Chemotaxis-Like Protein; Flagellar Hook-Basal Body Complex Protein FliE
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSKSVDETVFDFFELLLHEEDSKAVASPNAPRNEAAVSLAGKKNEAQLLDDAILAERSQAKAHASVTIAAEVQPQKAKSA SNMSHLDEPAPLVNKQALEKLLAPVLKTVEDKPAEAMAEVAPEVVQVQEVAHDENISSGATQNDANVTFEQPSAVVESEI DIETTPETQVGFAPPSITKDLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNL VDTCAWVMPEKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKRPWLAGVVKEQMCGILHVQAL VEMLDAGLGCQDSIG
Sequences:
>Translated_335_residues MSKSVDETVFDFFELLLHEEDSKAVASPNAPRNEAAVSLAGKKNEAQLLDDAILAERSQAKAHASVTIAAEVQPQKAKSA SNMSHLDEPAPLVNKQALEKLLAPVLKTVEDKPAEAMAEVAPEVVQVQEVAHDENISSGATQNDANVTFEQPSAVVESEI DIETTPETQVGFAPPSITKDLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNL VDTCAWVMPEKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKRPWLAGVVKEQMCGILHVQAL VEMLDAGLGCQDSIG >Mature_334_residues SKSVDETVFDFFELLLHEEDSKAVASPNAPRNEAAVSLAGKKNEAQLLDDAILAERSQAKAHASVTIAAEVQPQKAKSAS NMSHLDEPAPLVNKQALEKLLAPVLKTVEDKPAEAMAEVAPEVVQVQEVAHDENISSGATQNDANVTFEQPSAVVESEID IETTPETQVGFAPPSITKDLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNLV DTCAWVMPEKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKRPWLAGVVKEQMCGILHVQALV EMLDAGLGCQDSIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36413; Mature: 36281
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSVDETVFDFFELLLHEEDSKAVASPNAPRNEAAVSLAGKKNEAQLLDDAILAERSQA CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH KAHASVTIAAEVQPQKAKSASNMSHLDEPAPLVNKQALEKLLAPVLKTVEDKPAEAMAEV HHHEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH APEVVQVQEVAHDENISSGATQNDANVTFEQPSAVVESEIDIETTPETQVGFAPPSITKD HHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCHHHHH LQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCEEEECHHCCHHHHHH VDTCAWVMPEKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKR HHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHCCHHHHCCCC PWLAGVVKEQMCGILHVQALVEMLDAGLGCQDSIG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SKSVDETVFDFFELLLHEEDSKAVASPNAPRNEAAVSLAGKKNEAQLLDDAILAERSQA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH KAHASVTIAAEVQPQKAKSASNMSHLDEPAPLVNKQALEKLLAPVLKTVEDKPAEAMAEV HHHEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH APEVVQVQEVAHDENISSGATQNDANVTFEQPSAVVESEIDIETTPETQVGFAPPSITKD HHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCHHHHH LQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCEEEECHHCCHHHHHH VDTCAWVMPEKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKR HHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHCCHHHHCCCC PWLAGVVKEQMCGILHVQALVEMLDAGLGCQDSIG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA