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The map label for this gene is flgC [H]

Identifier: 113969604

GI number: 113969604

Start: 1466924

End: 1467340

Strand: Direct

Name: flgC [H]

Synonym: Shewmr4_1260

Alternate gene names: 113969604

Gene position: 1466924-1467340 (Clockwise)

Preceding gene: 113969603

Following gene: 113969605

Centisome position: 31.17

GC content: 45.56

Gene sequence:

>417_bases
ATGAGTTTATTTAGCATTTTTGATGTGGCTGGCTCTGGTATGTCAGCCCAGTCCGTCAGGCTCAATACCACAGCGAGTAA
CATCGCTAACGCCGATTCTGTTTCTAGCAGTATTGATAAAACTTACCGCTCTCGTCATCCGATTTTTGAAGCTGAAATGG
CCAAGGCGCAGAGTCAGCAACAAGCCTCTCAAGGTGTTGCGGTGAAGGGTATCGTTGAGAGTGATAAACCCCTATTAAAA
GAGTATTCGCCGGATCACCCCATGGCGGATGCGGATGGTTTTATTTATAAGCCGAATGTGAATGTCATGGAAGAAATGGC
GGATATGATCTCTGCCTCTCGCTCATATCAGATGAATGTTCAAGTCGCTGAAGCCGCAAAATCAATGCTGCAACAAACAC
TTGGGATGGGTAAATAA

Upstream 100 bases:

>100_bases
AGTCGGCATTTATGCAAAATGCCCTTGAATATCAAATGTCTCTGGGATTTTTAGACAGTAAGTTTAGCGGCATGAAAAAA
GCGCTGAGAGGGGATTAATC

Downstream 100 bases:

>100_bases
GATGCGTTATTTAGGAGGTAAGCTGTGAGCCTCATTAATCAACTTAGCCAGACCTCGGCTCAGCCGACTCAAACTAAGAC
TCAATCGAATACGGTGGCAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQQASQGVAVKGIVESDKPLLK
EYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLGMGK

Sequences:

>Translated_138_residues
MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQQASQGVAVKGIVESDKPLLK
EYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLGMGK
>Mature_137_residues
SLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQQASQGVAVKGIVESDKPLLKE
YSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLGMGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=45.6521739130435, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14901; Mature: 14770

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQ
CCHHHHHHHHCCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV
HHHCCCEEEEECCCCCHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEH
QVAEAAKSMLQQTLGMGK
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQ
CHHHHHHHHCCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV
HHHCCCEEEEECCCCCHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEH
QVAEAAKSMLQQTLGMGK
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]