Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is 113969592

Identifier: 113969592

GI number: 113969592

Start: 1457690

End: 1458631

Strand: Direct

Name: 113969592

Synonym: Shewmr4_1248

Alternate gene names: NA

Gene position: 1457690-1458631 (Clockwise)

Preceding gene: 113969591

Following gene: 113969596

Centisome position: 30.97

GC content: 49.15

Gene sequence:

>942_bases
GTGACTAAATCACTTGATTCTCGAGTTAGCATAAAACATAGCCTAGTTTGCATGGGAGTGAGTTTAATACCGCTTTTAAG
CTTTTGTGCATCAGCGGCAGAAGCACCTAAGCAATATAAACCCTTTAAGTTGAGCGTATCGCAGATTAGTACCCAGAGAG
CCTCGGTTGCCAATGGCGATACCGAGTTGCAGCGGGACAGTTTATTACTCAACGCCAGCGTCAATATTCCACTGGATAAA
CAATGGTCTATTGGAATGCGTGTCGGTTACGACAGACTCGACTACGATTGGCGCAATATCCGTTTAACGGGGGCGAATAA
CGCCGCAGGCCTGTTTAGTGATGCGGGTGAAACCTGGGAAAATATCGACCGTTACCGCGCGGGCCTATCCCTTAGCTATC
GGATGGATAAGCATTGGTCCTTTATGTTGTCGCCACAACTTCAATATGCCTATGCTGATACTGCGTCAGCTAGCAATGCA
CAGAGTTATGGTGTGGTTGCGTCGGCCATGTATGCCTTCGAGTCGGGCAATATGCTCGGTTTTGGCGTTGCGTATTTAAA
CGATATCGATGAAGTGCGCACTATGCCTTATCTGGCGGTGAGTTGGCAGATTAATGATTGTTGGCGGTTAGCTAACCCCT
TCCAAGCGGGATTTAGTGGCCCTGCGGGTTTGGAGTTGAGTTATCAAGTGAGCCCTGCATGGAATGTTGGCTTTGGTAAT
TCACGCCGCACCGAGCGATTTTTAGTCGCCGATAAAGATACCGTGGTGGAGACTAACGAGTGGGTGAGTTATCTGCGTGC
TGGTTGGCAAGCTACGCCGGCCATTGCGCTGAATCTTTACGCGGGTTACTACTTCAATGGTGAGTTGGAAGTTACTCATC
AAGCGGCGCTCGACATCGATAACCAAGGCGCTGCGGCCTTGGATCTCGAGTTCCGATTTTAA

Upstream 100 bases:

>100_bases
TTGGTATCAGTTTGTATCTTCTTCGAAAAGAGTGAACTTTTGTTTGAAATCGAGCGTATTATCCGCAACAAATGACTTAA
CAGTAACGCAAGGAGCAGGC

Downstream 100 bases:

>100_bases
TTACTGGCCCAGCATGGCCTCTTTGAGGCTCTTCTGGGCTGGTTTTTCTCCTAGCCAAATTTTAAGTAAGGCCTGGCGGA
ACATTTCCCCTTCAATTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTKSLDSRVSIKHSLVCMGVSLIPLLSFCASAAEAPKQYKPFKLSVSQISTQRASVANGDTELQRDSLLLNASVNIPLDK
QWSIGMRVGYDRLDYDWRNIRLTGANNAAGLFSDAGETWENIDRYRAGLSLSYRMDKHWSFMLSPQLQYAYADTASASNA
QSYGVVASAMYAFESGNMLGFGVAYLNDIDEVRTMPYLAVSWQINDCWRLANPFQAGFSGPAGLELSYQVSPAWNVGFGN
SRRTERFLVADKDTVVETNEWVSYLRAGWQATPAIALNLYAGYYFNGELEVTHQAALDIDNQGAAALDLEFRF

Sequences:

>Translated_313_residues
MTKSLDSRVSIKHSLVCMGVSLIPLLSFCASAAEAPKQYKPFKLSVSQISTQRASVANGDTELQRDSLLLNASVNIPLDK
QWSIGMRVGYDRLDYDWRNIRLTGANNAAGLFSDAGETWENIDRYRAGLSLSYRMDKHWSFMLSPQLQYAYADTASASNA
QSYGVVASAMYAFESGNMLGFGVAYLNDIDEVRTMPYLAVSWQINDCWRLANPFQAGFSGPAGLELSYQVSPAWNVGFGN
SRRTERFLVADKDTVVETNEWVSYLRAGWQATPAIALNLYAGYYFNGELEVTHQAALDIDNQGAAALDLEFRF
>Mature_312_residues
TKSLDSRVSIKHSLVCMGVSLIPLLSFCASAAEAPKQYKPFKLSVSQISTQRASVANGDTELQRDSLLLNASVNIPLDKQ
WSIGMRVGYDRLDYDWRNIRLTGANNAAGLFSDAGETWENIDRYRAGLSLSYRMDKHWSFMLSPQLQYAYADTASASNAQ
SYGVVASAMYAFESGNMLGFGVAYLNDIDEVRTMPYLAVSWQINDCWRLANPFQAGFSGPAGLELSYQVSPAWNVGFGNS
RRTERFLVADKDTVVETNEWVSYLRAGWQATPAIALNLYAGYYFNGELEVTHQAALDIDNQGAAALDLEFRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34756; Mature: 34625

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSLDSRVSIKHSLVCMGVSLIPLLSFCASAAEAPKQYKPFKLSVSQISTQRASVANGD
CCCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCC
TELQRDSLLLNASVNIPLDKQWSIGMRVGYDRLDYDWRNIRLTGANNAAGLFSDAGETWE
CHHCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCHHHH
NIDRYRAGLSLSYRMDKHWSFMLSPQLQYAYADTASASNAQSYGVVASAMYAFESGNMLG
HHHHHHHCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEE
FGVAYLNDIDEVRTMPYLAVSWQINDCWRLANPFQAGFSGPAGLELSYQVSPAWNVGFGN
EHHHHHHCHHHHHCCCEEEEEEEECHHHHHCCCHHCCCCCCCCCEEEEEECCCEECCCCC
SRRTERFLVADKDTVVETNEWVSYLRAGWQATPAIALNLYAGYYFNGELEVTHQAALDID
CCCCEEEEEECCCCEEECHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEEEEEEEEC
NQGAAALDLEFRF
CCCCEEEEEEEEC
>Mature Secondary Structure 
TKSLDSRVSIKHSLVCMGVSLIPLLSFCASAAEAPKQYKPFKLSVSQISTQRASVANGD
CCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCC
TELQRDSLLLNASVNIPLDKQWSIGMRVGYDRLDYDWRNIRLTGANNAAGLFSDAGETWE
CHHCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCHHHH
NIDRYRAGLSLSYRMDKHWSFMLSPQLQYAYADTASASNAQSYGVVASAMYAFESGNMLG
HHHHHHHCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEE
FGVAYLNDIDEVRTMPYLAVSWQINDCWRLANPFQAGFSGPAGLELSYQVSPAWNVGFGN
EHHHHHHCHHHHHCCCEEEEEEEECHHHHHCCCHHCCCCCCCCCEEEEEECCCEECCCCC
SRRTERFLVADKDTVVETNEWVSYLRAGWQATPAIALNLYAGYYFNGELEVTHQAALDID
CCCCEEEEEECCCCEEECHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEEEEEEEEC
NQGAAALDLEFRF
CCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA