Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

Click here to switch to the map view.

The map label for this gene is 113969415

Identifier: 113969415

GI number: 113969415

Start: 1253540

End: 1253968

Strand: Direct

Name: 113969415

Synonym: Shewmr4_1071

Alternate gene names: NA

Gene position: 1253540-1253968 (Clockwise)

Preceding gene: 113969413

Following gene: 113969417

Centisome position: 26.64

GC content: 48.25

Gene sequence:

>429_bases
ATGGCGGATAAAGTCGTTGAAGTCACCACACATATGGGAAGCGGTTGGAAGGTTACGGCGCAGGTGCGTGAGCATTTGCT
GATTATCGATCAACCCAGCGCGACCAATGAAGGAGCGAATCCCTTAGAGACTTTTTTATTTTCGCTCGGAGGCTGTATTT
CGGCGATTGCTAAGATGGTTGCGCGTGAGCGAAATATCACCATTCACCAGTTCGATGTGCATGTCAGAGCCGTGATGAAT
TCGGCGGGATTACTAGGCCAGCCTTCGGATGATCCTGTGGGATTTAAAGAAATTGCCATCAATGCCAGCATTGATGCTGA
CTTAACCGATGCACAAAAGAGCGAGTTTTTAGATACTGTTTGTAACCGTTGCCCTGTCCACGACAATCTGCTGCGCCCAA
GTTTAGTCACTCACCAAGTTCAGCACTAA

Upstream 100 bases:

>100_bases
ACAAAACGAGTTAGGCCATAAAACTGTGATCTTAAGTTGTGACTTTTGGTTTTTTAATTATTAGAATAATCTGATTGAAA
AAAAACTAATGGAGTAAGTC

Downstream 100 bases:

>100_bases
TCTCAAGATTAATTTCGATAGCGGCTTAAAAGCATAAACCCCAGAGTTTGCTGGGGTTTATGTCAATGGTTATCAGCTAG
TCGCACTATCACGCATTATT

Product: OsmC family protein

Products: NA

Alternate protein names: OsmC-Like Protein; OsmC-Like Protein Superfamily Protein; Redox Protein Regulator Of Disulfide Bond Formation

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MADKVVEVTTHMGSGWKVTAQVREHLLIIDQPSATNEGANPLETFLFSLGGCISAIAKMVARERNITIHQFDVHVRAVMN
SAGLLGQPSDDPVGFKEIAINASIDADLTDAQKSEFLDTVCNRCPVHDNLLRPSLVTHQVQH

Sequences:

>Translated_142_residues
MADKVVEVTTHMGSGWKVTAQVREHLLIIDQPSATNEGANPLETFLFSLGGCISAIAKMVARERNITIHQFDVHVRAVMN
SAGLLGQPSDDPVGFKEIAINASIDADLTDAQKSEFLDTVCNRCPVHDNLLRPSLVTHQVQH
>Mature_141_residues
ADKVVEVTTHMGSGWKVTAQVREHLLIIDQPSATNEGANPLETFLFSLGGCISAIAKMVARERNITIHQFDVHVRAVMNS
AGLLGQPSDDPVGFKEIAINASIDADLTDAQKSEFLDTVCNRCPVHDNLLRPSLVTHQVQH

Specific function: Unknown

COG id: COG1765

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15484; Mature: 15353

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKVVEVTTHMGSGWKVTAQVREHLLIIDQPSATNEGANPLETFLFSLGGCISAIAKMV
CCCCCEEEEECCCCCEEEEHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ARERNITIHQFDVHVRAVMNSAGLLGQPSDDPVGFKEIAINASIDADLTDAQKSEFLDTV
HHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHH
CNRCPVHDNLLRPSLVTHQVQH
HHCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
ADKVVEVTTHMGSGWKVTAQVREHLLIIDQPSATNEGANPLETFLFSLGGCISAIAKMV
CCCCEEEEECCCCCEEEEHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ARERNITIHQFDVHVRAVMNSAGLLGQPSDDPVGFKEIAINASIDADLTDAQKSEFLDTV
HHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHH
CNRCPVHDNLLRPSLVTHQVQH
HHCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA