Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

Click here to switch to the map view.

The map label for this gene is 113969326

Identifier: 113969326

GI number: 113969326

Start: 1150359

End: 1150709

Strand: Direct

Name: 113969326

Synonym: Shewmr4_0982

Alternate gene names: NA

Gene position: 1150359-1150709 (Clockwise)

Preceding gene: 113969324

Following gene: 113969327

Centisome position: 24.44

GC content: 51.57

Gene sequence:

>351_bases
ATGAATAAATCAGCCTATTTAGCCGCAATGGAGATTACTCCCTGGCAGCTTCGTGATACTAAAGTGCGACCTTATCAAGT
GGTTTGGGATGCAGATGAGATGACGCCCGCCGCCGAGCCTTTACTCGAAACCGTGCTGGGATTAATCGGTATCAGTAAGG
ACGACTGTGAGTTCAACACTGAGCCACATAAGGGCAAAACCATCGTCTGGGATTTACGCCGCCACAGGGTTAGGCCCAGA
GTGGCTTGGTTAGTGTCGGATCCCTTAGCGGACTTACTGTCTCGCAGTGAGGCAAAGCGTGCCTTGTGGACGCAGATTTG
CCAGTGGCGTGAACAGCAATTAACGGCCTAA

Upstream 100 bases:

>100_bases
GATGGATTTGTATGAGGACTTGCCTCGAGACAATAACATTCAGCCTATTTAGCTGGTATCCTTATGCGGTGTCAGTGCCT
AATGAAACCCCAATAATCCC

Downstream 100 bases:

>100_bases
GCCTCTATGGGTCGTGCCCTGTATACATTATCTTAAGTTGCCTTTTAATTTGGATTGTCCCGTGAGTCATCAAGTTCTTA
AAACCCTTAGTGAATCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MNKSAYLAAMEITPWQLRDTKVRPYQVVWDADEMTPAAEPLLETVLGLIGISKDDCEFNTEPHKGKTIVWDLRRHRVRPR
VAWLVSDPLADLLSRSEAKRALWTQICQWREQQLTA

Sequences:

>Translated_116_residues
MNKSAYLAAMEITPWQLRDTKVRPYQVVWDADEMTPAAEPLLETVLGLIGISKDDCEFNTEPHKGKTIVWDLRRHRVRPR
VAWLVSDPLADLLSRSEAKRALWTQICQWREQQLTA
>Mature_116_residues
MNKSAYLAAMEITPWQLRDTKVRPYQVVWDADEMTPAAEPLLETVLGLIGISKDDCEFNTEPHKGKTIVWDLRRHRVRPR
VAWLVSDPLADLLSRSEAKRALWTQICQWREQQLTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13472; Mature: 13472

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSAYLAAMEITPWQLRDTKVRPYQVVWDADEMTPAAEPLLETVLGLIGISKDDCEFNT
CCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
EPHKGKTIVWDLRRHRVRPRVAWLVSDPLADLLSRSEAKRALWTQICQWREQQLTA
CCCCCCEEEEEHHHCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKSAYLAAMEITPWQLRDTKVRPYQVVWDADEMTPAAEPLLETVLGLIGISKDDCEFNT
CCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
EPHKGKTIVWDLRRHRVRPRVAWLVSDPLADLLSRSEAKRALWTQICQWREQQLTA
CCCCCCEEEEEHHHCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA