| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
Click here to switch to the map view.
The map label for this gene is leuE [H]
Identifier: 113969234
GI number: 113969234
Start: 1042744
End: 1043358
Strand: Direct
Name: leuE [H]
Synonym: Shewmr4_0890
Alternate gene names: 113969234
Gene position: 1042744-1043358 (Clockwise)
Preceding gene: 113969233
Following gene: 113969236
Centisome position: 22.16
GC content: 50.24
Gene sequence:
>615_bases ATGAGCTTTAGTACTTGGTTAGGACTATTGGCGATTTGTTGCTTGGGCGCTATGTCTCCCGGGCCGAGTTTGGCCATGGT TGTGCGTCATACCTTGGGCGGTGGTCGCGGCAAAGGGATCGTTTGCGCTTGGGCGCACTCGATTGGTATTGGTATTTATG CGTTAGTGACGCTACTCGGACTAGCCGTTGTATTGAAAAAAGCGCCATTGATTTTTAATGGGATCGCGATTTTAGGCGCG CTCTATCTCGCATGGATGGGGATCCAAGCATTGCGCTCAAACGGTGGTATGCAGGCAAAACTTGCGGCGGGGGAGGCTAC GGATACGCTCACTGCGGCGCGCGATGGTATCGCAATTTCCCTCTTCAATCCTAAGATTATGTTGTTCTTTTTAGCGCTGT TTAGCCAGTTTGTGATGGTGGCCGATAGCTTGACGGGTCAAGCACTTATCGTGCTAACGCCTTTGGTAGTTGATGGGCTT TGGTACACCTTGATTGCCTTACTGTTGTCCCATTCGAGTGTATTGCCTAAGTTACGGGAAAAAGCGGGACTTATTGATAA ACTTTCTGGTGTGGTACTGATCCTGCTCGCGATACGCGTGGTCTACACTCTCTGA
Upstream 100 bases:
>100_bases ACGCGGCTAAATGAGAGTGACCGTATTATTTGGCCAGTGTTAAACTGCCACTCCTGTGAAGGCCCTATTGAGGGCCTTTT TATGCTTTAAAGGGTTAAAA
Downstream 100 bases:
>100_bases CGTTTCACAATGCGTATTGATGAGTGTGAAGAAATAAGTGCGAAGAGATAAAAAAACGCCATCACAAGATGGCGTTTTTT ATGGGATTTTAGCAGGCGAT
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSFSTWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIVCAWAHSIGIGIYALVTLLGLAVVLKKAPLIFNGIAILGA LYLAWMGIQALRSNGGMQAKLAAGEATDTLTAARDGIAISLFNPKIMLFFLALFSQFVMVADSLTGQALIVLTPLVVDGL WYTLIALLLSHSSVLPKLREKAGLIDKLSGVVLILLAIRVVYTL
Sequences:
>Translated_204_residues MSFSTWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIVCAWAHSIGIGIYALVTLLGLAVVLKKAPLIFNGIAILGA LYLAWMGIQALRSNGGMQAKLAAGEATDTLTAARDGIAISLFNPKIMLFFLALFSQFVMVADSLTGQALIVLTPLVVDGL WYTLIALLLSHSSVLPKLREKAGLIDKLSGVVLILLAIRVVYTL >Mature_203_residues SFSTWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIVCAWAHSIGIGIYALVTLLGLAVVLKKAPLIFNGIAILGAL YLAWMGIQALRSNGGMQAKLAAGEATDTLTAARDGIAISLFNPKIMLFFLALFSQFVMVADSLTGQALIVLTPLVVDGLW YTLIALLLSHSSVLPKLREKAGLIDKLSGVVLILLAIRVVYTL
Specific function: Exporter of leucine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1786522, Length=190, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI48994978, Length=195, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788099, Length=185, Percent_Identity=26.4864864864865, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21417; Mature: 21286
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSTWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIVCAWAHSIGIGIYALVTLLG CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHH LAVVLKKAPLIFNGIAILGALYLAWMGIQALRSNGGMQAKLAAGEATDTLTAARDGIAIS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCEEEE LFNPKIMLFFLALFSQFVMVADSLTGQALIVLTPLVVDGLWYTLIALLLSHSSVLPKLRE EECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH KAGLIDKLSGVVLILLAIRVVYTL HHCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFSTWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIVCAWAHSIGIGIYALVTLLG CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHH LAVVLKKAPLIFNGIAILGALYLAWMGIQALRSNGGMQAKLAAGEATDTLTAARDGIAIS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCEEEE LFNPKIMLFFLALFSQFVMVADSLTGQALIVLTPLVVDGLWYTLIALLLSHSSVLPKLRE EECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH KAGLIDKLSGVVLILLAIRVVYTL HHCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA