| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is ordL [H]
Identifier: 113969223
GI number: 113969223
Start: 1029269
End: 1030744
Strand: Direct
Name: ordL [H]
Synonym: Shewmr4_0879
Alternate gene names: 113969223
Gene position: 1029269-1030744 (Clockwise)
Preceding gene: 113969222
Following gene: 113969224
Centisome position: 21.87
GC content: 51.08
Gene sequence:
>1476_bases GTGAAAGAGCGCGGATTTTGGTTCGACACTGAGCCTAAGTTAACTCAACGAGCCGTTTTACCACCCTTAGAGCAGGATAT CAGCGCCGATGTTGCCATTATTGGTGCGGGGTATTCCGGGCTTTGGACTGCCTATTATCTAAAGCTATACCAGCCAAATC TGTCTGTGGTTATCCTTGAGGCCGAACGCATAGGCCAAGGTGCATCCGGTCGCAATGGTGGTTGGTTGATGGGCAGTTTC AGTGGTGATGTGGCCTACCTTAATCGGCTCGAGGGCGAGCAGCGCCTTAGCGCTAAAGCCATTATTCAAGCAACTATTTC TGAAGTGGCCACAGTTTGCGCCAAGCATCATATCGACTGTGATTTACACCATGGCGGTAACTTGCGGGTGGCGGCGCGTT ATTCCGAGCAATTAGCCAATATTAAAGCCGAATTAGCGCAGTGGCGCGCAGAAGGTTTTGGTGAAGAAGATATTCGTTGG CTGGATAAGACAGAGCTCGATAAGCAAGTGTCTATGGCCGAGGGCCAAGCGGCACTTTTTACTCCCCATTGCGCGCGAAT ACATCCGGCGAAACTCGTCTGTGGTTTGGCTGACCTAGTGCAACGCTTAGGGGTGAAGATCTACGAGCATACTCTAGTAA ATCACATGGCGCATCTTGGTGATGCACAAACCCTATTGCAAACACCAAAGGGACGAGTTCGTGCGACGATTGTGGTGCCC GCGGTGGAAGGTTATCTGCGTCAGCTCAGTGGACTTGGGCGATTTACCTTACCCGTGCAGAGTTTACTTATCGCCACTGA GCCGTTAACGGATGCCACATGGGATGCAATTGGCCTAGCCAATCGCGCGACCTTTAGTGATGCCAGCCGCATAGTGACTT ATGGCCAGCGTAGCCCTGATAATCGGCTGATATTTGGTGCCCGTGGCGGCTATGGCTTTGGCGCGGAAATACGCACCGAA TTTGGTTTTGACCCTAAACTGTTTAACGGGAAATTTCCTGCAAATCAAAGCCCACCTCAGTGTGATTTCGAGGGCGAATT TGGCTTTCGTTATCAATTATTATTGGCGTTATTTCCTCAACTTAACGGCGTGCAAATTACCCATGGTTGGGGCGGAACGT TAGCCTTGGCGAGGCGCTTTGCTCCCCATGCCATCTTTGATCAAAGTCTGGGTTTAGGCCTGATTGGCGGCTATGGCGGG GAAGGTGTCGGGGCGGCAAACCTATTTGCCCGCACGCTGGTGGACTTGATATTAGGGCGTGATACACAGCTTGCATCTAT GCCTTGGGCGTTTAATGCTCCAGTACAACAGGTATTAGCACCCTGGGAGCGCGAGCCTTTGCCTTGGCTCGCATACCATG GCATGAATAAGATTTTTGCGTGGGAAGATAGGCTCTACAGTCAGCCAAAGAGTGCGGCTTGGCAAAAAGGTTTAGCTAAG CGGTTCGCGAATCGATTAGAAGGCTTAATGAGTTAA
Upstream 100 bases:
>100_bases GTATCGTTACCTGGGGGCCTATCAGCAGCGCCTGGGTTGATACCCATGTCGATGAAATTGCCGCAATTATTGGTGTTAAT GCCTCGAGCGAAACCTTGGC
Downstream 100 bases:
>100_bases TCTACTTATAAACCAGAGAGTTAATCAGGCCATTACCGATTCATCTTTTTAATAAACGATTTATTCATATACGATAACTA CTTTGATGATCCGATTATGT
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MKERGFWFDTEPKLTQRAVLPPLEQDISADVAIIGAGYSGLWTAYYLKLYQPNLSVVILEAERIGQGASGRNGGWLMGSF SGDVAYLNRLEGEQRLSAKAIIQATISEVATVCAKHHIDCDLHHGGNLRVAARYSEQLANIKAELAQWRAEGFGEEDIRW LDKTELDKQVSMAEGQAALFTPHCARIHPAKLVCGLADLVQRLGVKIYEHTLVNHMAHLGDAQTLLQTPKGRVRATIVVP AVEGYLRQLSGLGRFTLPVQSLLIATEPLTDATWDAIGLANRATFSDASRIVTYGQRSPDNRLIFGARGGYGFGAEIRTE FGFDPKLFNGKFPANQSPPQCDFEGEFGFRYQLLLALFPQLNGVQITHGWGGTLALARRFAPHAIFDQSLGLGLIGGYGG EGVGAANLFARTLVDLILGRDTQLASMPWAFNAPVQQVLAPWEREPLPWLAYHGMNKIFAWEDRLYSQPKSAAWQKGLAK RFANRLEGLMS
Sequences:
>Translated_491_residues MKERGFWFDTEPKLTQRAVLPPLEQDISADVAIIGAGYSGLWTAYYLKLYQPNLSVVILEAERIGQGASGRNGGWLMGSF SGDVAYLNRLEGEQRLSAKAIIQATISEVATVCAKHHIDCDLHHGGNLRVAARYSEQLANIKAELAQWRAEGFGEEDIRW LDKTELDKQVSMAEGQAALFTPHCARIHPAKLVCGLADLVQRLGVKIYEHTLVNHMAHLGDAQTLLQTPKGRVRATIVVP AVEGYLRQLSGLGRFTLPVQSLLIATEPLTDATWDAIGLANRATFSDASRIVTYGQRSPDNRLIFGARGGYGFGAEIRTE FGFDPKLFNGKFPANQSPPQCDFEGEFGFRYQLLLALFPQLNGVQITHGWGGTLALARRFAPHAIFDQSLGLGLIGGYGG EGVGAANLFARTLVDLILGRDTQLASMPWAFNAPVQQVLAPWEREPLPWLAYHGMNKIFAWEDRLYSQPKSAAWQKGLAK RFANRLEGLMS >Mature_491_residues MKERGFWFDTEPKLTQRAVLPPLEQDISADVAIIGAGYSGLWTAYYLKLYQPNLSVVILEAERIGQGASGRNGGWLMGSF SGDVAYLNRLEGEQRLSAKAIIQATISEVATVCAKHHIDCDLHHGGNLRVAARYSEQLANIKAELAQWRAEGFGEEDIRW LDKTELDKQVSMAEGQAALFTPHCARIHPAKLVCGLADLVQRLGVKIYEHTLVNHMAHLGDAQTLLQTPKGRVRATIVVP AVEGYLRQLSGLGRFTLPVQSLLIATEPLTDATWDAIGLANRATFSDASRIVTYGQRSPDNRLIFGARGGYGFGAEIRTE FGFDPKLFNGKFPANQSPPQCDFEGEFGFRYQLLLALFPQLNGVQITHGWGGTLALARRFAPHAIFDQSLGLGLIGGYGG EGVGAANLFARTLVDLILGRDTQLASMPWAFNAPVQQVLAPWEREPLPWLAYHGMNKIFAWEDRLYSQPKSAAWQKGLAK RFANRLEGLMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=425, Percent_Identity=29.8823529411765, Blast_Score=145, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 54045; Mature: 54045
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERGFWFDTEPKLTQRAVLPPLEQDISADVAIIGAGYSGLWTAYYLKLYQPNLSVVILE CCCCCCCCCCCCCHHHHHCCCCHHHCCCCCEEEEECCCHHHHHHHHHHEECCCCEEEEEE AERIGQGASGRNGGWLMGSFSGDVAYLNRLEGEQRLSAKAIIQATISEVATVCAKHHIDC HHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE DLHHGGNLRVAARYSEQLANIKAELAQWRAEGFGEEDIRWLDKTELDKQVSMAEGQAALF EEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE TPHCARIHPAKLVCGLADLVQRLGVKIYEHTLVNHMAHLGDAQTLLQTPKGRVRATIVVP CCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEH AVEGYLRQLSGLGRFTLPVQSLLIATEPLTDATWDAIGLANRATFSDASRIVTYGQRSPD HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHEEECCCCCC NRLIFGARGGYGFGAEIRTEFGFDPKLFNGKFPANQSPPQCDFEGEFGFRYQLLLALFPQ CCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC LNGVQITHGWGGTLALARRFAPHAIFDQSLGLGLIGGYGGEGVGAANLFARTLVDLILGR CCCEEEECCCCHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCC DTQLASMPWAFNAPVQQVLAPWEREPLPWLAYHGMNKIFAWEDRLYSQPKSAAWQKGLAK CCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCEEEEHHHHHCCCHHHHHHHHHHH RFANRLEGLMS HHHHHHHHHCC >Mature Secondary Structure MKERGFWFDTEPKLTQRAVLPPLEQDISADVAIIGAGYSGLWTAYYLKLYQPNLSVVILE CCCCCCCCCCCCCHHHHHCCCCHHHCCCCCEEEEECCCHHHHHHHHHHEECCCCEEEEEE AERIGQGASGRNGGWLMGSFSGDVAYLNRLEGEQRLSAKAIIQATISEVATVCAKHHIDC HHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE DLHHGGNLRVAARYSEQLANIKAELAQWRAEGFGEEDIRWLDKTELDKQVSMAEGQAALF EEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE TPHCARIHPAKLVCGLADLVQRLGVKIYEHTLVNHMAHLGDAQTLLQTPKGRVRATIVVP CCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEH AVEGYLRQLSGLGRFTLPVQSLLIATEPLTDATWDAIGLANRATFSDASRIVTYGQRSPD HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHEEECCCCCC NRLIFGARGGYGFGAEIRTEFGFDPKLFNGKFPANQSPPQCDFEGEFGFRYQLLLALFPQ CCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC LNGVQITHGWGGTLALARRFAPHAIFDQSLGLGLIGGYGGEGVGAANLFARTLVDLILGR CCCEEEECCCCHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCC DTQLASMPWAFNAPVQQVLAPWEREPLPWLAYHGMNKIFAWEDRLYSQPKSAAWQKGLAK CCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCEEEEHHHHHCCCHHHHHHHHHHH RFANRLEGLMS HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]