| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969153
Identifier: 113969153
GI number: 113969153
Start: 945710
End: 946120
Strand: Direct
Name: 113969153
Synonym: Shewmr4_0809
Alternate gene names: NA
Gene position: 945710-946120 (Clockwise)
Preceding gene: 113969149
Following gene: 113969154
Centisome position: 20.09
GC content: 44.53
Gene sequence:
>411_bases ATGCCAAAGCAGCAGATGTCTGAAAGACGTTTTTGGGTACAGCGGCTAAGTAAAACAACCCTAAGAGCTTTACATATATT GGGCATTGCCGGTGCGGGTGGAGGAATATTACTCTCGGTCGATAAATCCCTCTGGTTGAATTATTGGTATCTGGCGATGG GGACCGGCAGCATATTGATGTTGTGGGAAATTATTCGAGATTGGCGTTGGTTAATTCAACTGAAAGGCGTGTTAACTCTT GGGAAATTAGGGCTACTTTGCCTGTTTGTGCCGCTTGCCAACTACAAGCCTGAACTGTTTATCTTAGTGTTATTTTTATC TGTGATAGTATCCCATGGCCCATCGGGGCTGAGGCACTACTCGATAGTGCATCGCAGACAGATAGACACTAAAAAAGAGA TAAAGGGATGA
Upstream 100 bases:
>100_bases TGAGTATTCAGTAAATAATTAAATCTCACCAGTGTTTTTTTGAGAAAATATAATATATTTTTCCAAATTGTTACTTGAGT GGTGTTAAGGGGTTAAATCT
Downstream 100 bases:
>100_bases CACACGCTACACTCAGCACGGCCTCGAGCTTAATTACCCAGTTTTCATGGCCTGAGCTTACAGGGCTTAAGGTATTGGAT TTAGCCTGCGGTTCAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MPKQQMSERRFWVQRLSKTTLRALHILGIAGAGGGILLSVDKSLWLNYWYLAMGTGSILMLWEIIRDWRWLIQLKGVLTL GKLGLLCLFVPLANYKPELFILVLFLSVIVSHGPSGLRHYSIVHRRQIDTKKEIKG
Sequences:
>Translated_136_residues MPKQQMSERRFWVQRLSKTTLRALHILGIAGAGGGILLSVDKSLWLNYWYLAMGTGSILMLWEIIRDWRWLIQLKGVLTL GKLGLLCLFVPLANYKPELFILVLFLSVIVSHGPSGLRHYSIVHRRQIDTKKEIKG >Mature_135_residues PKQQMSERRFWVQRLSKTTLRALHILGIAGAGGGILLSVDKSLWLNYWYLAMGTGSILMLWEIIRDWRWLIQLKGVLTLG KLGLLCLFVPLANYKPELFILVLFLSVIVSHGPSGLRHYSIVHRRQIDTKKEIKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15598; Mature: 15467
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQQMSERRFWVQRLSKTTLRALHILGIAGAGGGILLSVDKSLWLNYWYLAMGTGSILM CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHEEECCCHHHH LWEIIRDWRWLIQLKGVLTLGKLGLLCLFVPLANYKPELFILVLFLSVIVSHGPSGLRHY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHH SIVHRRQIDTKKEIKG HHHHHHHCCCHHHCCC >Mature Secondary Structure PKQQMSERRFWVQRLSKTTLRALHILGIAGAGGGILLSVDKSLWLNYWYLAMGTGSILM CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHEEECCCHHHH LWEIIRDWRWLIQLKGVLTLGKLGLLCLFVPLANYKPELFILVLFLSVIVSHGPSGLRHY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHH SIVHRRQIDTKKEIKG HHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA