| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is gltT [H]
Identifier: 113969108
GI number: 113969108
Start: 890252
End: 891559
Strand: Direct
Name: gltT [H]
Synonym: Shewmr4_0764
Alternate gene names: 113969108
Gene position: 890252-891559 (Clockwise)
Preceding gene: 113969107
Following gene: 113969110
Centisome position: 18.92
GC content: 50.46
Gene sequence:
>1308_bases ATGTCAAAACATAGGTCATCAGCCCTAGGCCGGATCTGGTCTTCCTGGATGTCAGTGCCCCTGTGGCTGCAAATTTTCGT TGGTATGGTGTTGGGGATTGCGGTGGGCGTCAGCTTAGGTGAGCAGGCTTCTTACCTGAAACCTATTGGCACCCTGTTTG TGAATACCATCAAGATGCTGATTGTGCCTTTAGTGTTTTGTTCATTGATTGTCGGTGTGACCTCAATGGAAGACACCGCC AAAATGGGCCGAATTGGTTTTAAATCCTTTGCGTTTTACCTTTGCACCACCGCGATTGCGATCAGTTTAGGTTTAGCCGT GGGCTATGTGGTGCAACCCGGTGCGGGCGTGCCTTTACTGCAACACGAAGCGGTGCAAACGGCGAAAGAAGTGCCTTCGG TGATGCAAACCCTGATTGATATTGTCCCTACTAACCCCGTTGCCGCCTTGGCGAGTGGCCAAATCCTGCAAGTCATTGTG TTTGCCGTGGCCTTAGGGATTGCCTTGGTCTTGATTGGCGACCATGGAAAGCCTGCGATTAAGGTATTTGAAAGCCTTGC CGAGGCCATGTACAAGCTTACCGACATGGTGATGAAGCTTGCTCCTTATGGGGTATTTGGTCTGATGGCATGGGTCGCGG GCGAGTATGGCATCGATATGCTGTGGCCGCTGATTAAAGTGATTATTGCCGTATATATTGGCTGTATTATCCACGTGTTA GGCTTCTACAGTATAGTGCTGCGCCTATTTGCCAAGCTGAATCCACTGCATTTTTTCAAGGGGATCAGCAATGCGATGGC GGTGGCATTTACCACTTCAAGTTCGGCGGGTACCTTACCGGCCAGCATGAAATGTGCGAGCGAATATCTCGGGGTCAATA AGAAGATCTCTAGCTTTGTGCTGCCCTTAGGGACCACCATCAATATGGATGGTACGGCCTTGTATCAAGGCGTGACCGCG CTGTTTGTGGCGCAGGCCTTTGGTATCGATTTAACTTGGGTCGACTATCTAACGATTATTTTAACCGCGACCTTAGCCTC AATCGGCACCGCGGGTGTGCCGGGCGCAGGCTTAGTGATGTTGACCTTAGTGCTTTCGACCGTGGGCTTACCCTTAGAAG GTGTGGCCTTGATTGCGGGGATTGACCGTATTCTCGATATGGCACGTACTGTCGTAAACGTTTCTGGTGACTTAGTGGCG ACGACTGTGATTGCTAAGTCGGAAGATGAGCTGGATGTTGAACATTACAATGCCGACATGGTACAGAGCGCTATGATTGC CGAGCAAAACGCCGCGACGAAAAGTTAA
Upstream 100 bases:
>100_bases TTTTATCCCTTATGTTAGACTCGGCGGCTGGCTAATTTAAGTTAGTCCCGCCAAGGATAAGGCTCAGCCCTATCATCATT TCAAACTCAAGGTTATAAAC
Downstream 100 bases:
>100_bases TTCATCGAATAATAAAAAACCGCCAACTAGGCGGTTTTTTATTATCGAAGCGAGCTTATTTAAGCTGGCTTAGGACGAGT ACGGGCTTATCGTCGCTGCT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSKHRSSALGRIWSSWMSVPLWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMEDTA KMGRIGFKSFAFYLCTTAIAISLGLAVGYVVQPGAGVPLLQHEAVQTAKEVPSVMQTLIDIVPTNPVAALASGQILQVIV FAVALGIALVLIGDHGKPAIKVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVL GFYSIVLRLFAKLNPLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTA LFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVMLTLVLSTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVA TTVIAKSEDELDVEHYNADMVQSAMIAEQNAATKS
Sequences:
>Translated_435_residues MSKHRSSALGRIWSSWMSVPLWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMEDTA KMGRIGFKSFAFYLCTTAIAISLGLAVGYVVQPGAGVPLLQHEAVQTAKEVPSVMQTLIDIVPTNPVAALASGQILQVIV FAVALGIALVLIGDHGKPAIKVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVL GFYSIVLRLFAKLNPLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTA LFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVMLTLVLSTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVA TTVIAKSEDELDVEHYNADMVQSAMIAEQNAATKS >Mature_434_residues SKHRSSALGRIWSSWMSVPLWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMEDTAK MGRIGFKSFAFYLCTTAIAISLGLAVGYVVQPGAGVPLLQHEAVQTAKEVPSVMQTLIDIVPTNPVAALASGQILQVIVF AVALGIALVLIGDHGKPAIKVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVLG FYSIVLRLFAKLNPLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTAL FVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVMLTLVLSTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVAT TVIAKSEDELDVEHYNADMVQSAMIAEQNAATKS
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=447, Percent_Identity=32.4384787472036, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI40254478, Length=491, Percent_Identity=32.7902240325866, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI5032093, Length=396, Percent_Identity=35.1010101010101, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI66773030, Length=480, Percent_Identity=31.25, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI169790839, Length=461, Percent_Identity=31.236442516269, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI223468566, Length=280, Percent_Identity=37.8571428571429, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI223468564, Length=271, Percent_Identity=38.0073800738007, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI4827012, Length=293, Percent_Identity=36.8600682593857, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI194239697, Length=297, Percent_Identity=36.026936026936, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI301601644, Length=191, Percent_Identity=36.1256544502618, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI262359914, Length=356, Percent_Identity=28.3707865168539, Blast_Score=127, Evalue=3e-29, Organism=Escherichia coli, GI1790514, Length=410, Percent_Identity=39.7560975609756, Blast_Score=281, Evalue=9e-77, Organism=Escherichia coli, GI1789947, Length=413, Percent_Identity=37.2881355932203, Blast_Score=244, Evalue=7e-66, Organism=Escherichia coli, GI1788024, Length=410, Percent_Identity=29.7560975609756, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1789473, Length=287, Percent_Identity=27.8745644599303, Blast_Score=98, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71996953, Length=460, Percent_Identity=35.4347826086957, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71983106, Length=477, Percent_Identity=34.1719077568134, Blast_Score=210, Evalue=9e-55, Organism=Caenorhabditis elegans, GI71983099, Length=481, Percent_Identity=34.0956340956341, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI193206505, Length=462, Percent_Identity=31.8181818181818, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17537407, Length=465, Percent_Identity=29.8924731182796, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI193206654, Length=418, Percent_Identity=30.3827751196172, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17541374, Length=418, Percent_Identity=30.622009569378, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24583025, Length=438, Percent_Identity=30.8219178082192, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI17137668, Length=438, Percent_Identity=30.8219178082192, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24583023, Length=438, Percent_Identity=30.8219178082192, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI281360481, Length=471, Percent_Identity=29.9363057324841, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI281360483, Length=471, Percent_Identity=29.9363057324841, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI17137666, Length=471, Percent_Identity=29.9363057324841, Blast_Score=145, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 45999; Mature: 45868
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00714 NA_DICARBOXYL_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHRSSALGRIWSSWMSVPLWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKML CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH IVPLVFCSLIVGVTSMEDTAKMGRIGFKSFAFYLCTTAIAISLGLAVGYVVQPGAGVPLL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QHEAVQTAKEVPSVMQTLIDIVPTNPVAALASGQILQVIVFAVALGIALVLIGDHGKPAI HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHH KVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFYSIVLRLFAKLNPLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFV HHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHH LPLGTTINMDGTALYQGVTALFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVM HCCCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LTLVLSTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVATTVIAKSEDELDVEHYNADM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHCCHHH VQSAMIAEQNAATKS HHHHHHHHCCCCCCC >Mature Secondary Structure SKHRSSALGRIWSSWMSVPLWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKML CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH IVPLVFCSLIVGVTSMEDTAKMGRIGFKSFAFYLCTTAIAISLGLAVGYVVQPGAGVPLL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QHEAVQTAKEVPSVMQTLIDIVPTNPVAALASGQILQVIVFAVALGIALVLIGDHGKPAI HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHH KVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFYSIVLRLFAKLNPLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFV HHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHH LPLGTTINMDGTALYQGVTALFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVM HCCCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LTLVLSTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVATTVIAKSEDELDVEHYNADM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHCCHHH VQSAMIAEQNAATKS HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]