| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969087
Identifier: 113969087
GI number: 113969087
Start: 863497
End: 865026
Strand: Direct
Name: 113969087
Synonym: Shewmr4_0743
Alternate gene names: NA
Gene position: 863497-865026 (Clockwise)
Preceding gene: 113969086
Following gene: 113969088
Centisome position: 18.35
GC content: 38.04
Gene sequence:
>1530_bases ATGGATAATTCTACAATGACTTACACTCTGGTGGTTGCTATAGCTTTACTTCTCATTGTCGGTTTTCTTCTCCTAAGAAA AACTTCAAAATTGAGTAAAAAACTTGCAGATACAGAGGCTCTTCGGTCCGTGGCAGAGTCAACAATCGAAGAGTATAAAG AAAGATACTCTCAGATATTTGATGTTGAAGCTGAGTGCGAAAAACTCAAGGCGCAGCTGAAATTTGATACGCAAAAAATA GAAGAGACAGCACTTCAAACCTTACACGAAATCGAACAAAAAAAAGCTGAGGCTAATGCGGAGCGTCAATCTATTGAAGA GAAGATCAATGAACTCCAGATTGACTATAAAAGTAAGAAAGCCACCTACGACTCTCTAACTAAGCAAATTGCCATATTTA ATGAGGATATTGAGCTTATTGAGCTTGGGTTCTATGAACCAAAGTTTGACTTTGATTCATCTGAAGCATTTAAAGAAGAG ATTAACAAGTGCAAAGAACGCCAGAAAACTTTACTGAAAGAGAAGTCTTCTAGCGGAGCGATATATTGTTTCCGTGAATG GACTGTTGATGGTTCAAGAAGTGAAGGAAGGAAAATGACTGATAAGAGTATCCGCCTCACTGCTCGAGCCTTTAATAACG AATGTGAGGCAGCGACTGCAAATTGTACGTGGAAAAACGTCACAAAGATGGAAGAGCGTATAAATATGGCATTTGCAGCA ATTAATAAGCTAAATGAACCAAATGCAATATCTATCACAGAACGTTATCTTAAAGAAAAATTGAGAGAACTTCAGTTGAC CTATGAATATCGTCAAAAGAAACAACGCGAGAAAGAAGAGCAAGCGGAAATCAAAGCTCAAATGCGTGAGGAAGCAAGGA TAGAGGCAGAGATAAAAAGAGCGGAAGATGAGGCTATTAAGGAGGAAAAGCGTTATCAAAAAGCCTTAGAAGTTGCGCGG CAGGAGCTTGAAAAGGCAAGTGATGAAATGAAATCAGAACTAGAAGAGCAGATAGCTCAGTTACAGGCCAACCTAGAAGA AGCTGAACGTAAGCACCAGCGTGTTCAATCAATGGCGGAACAAACCAAAAGAGGTCACGTTTATATTATTTCTAATATTG GTTCATTTGGAGAAAATATTTATAAGATAGGTATGACTCGCCGATTAGAGCCTATGGATAGAGTTAATGAGCTTGGAGAT GCTTCGGTACCTTTTGCCTTCGATGTACATGCTATGATTTATACCAATGATGCACCAACTCTTGAGAAAAAACTTCACGA CGAGTTTGATTCTCACCGATTAAATATGATTAATAGACGTAAAGAGTTTTTTAACGTATCTCTGGAAGGTATAAAACATG CGGTAAGTAAATTTTCCGAACAGTCTGTGGAGTTTATTGAAACAGCTGTTGCTCAGGATTATTACGAAACAAAAGCAATG AAGAAACAACTTTTGGTAAGACAAGGAAAGTTGGAATTAGAAGAGTCATATTCATCTAAAGCCATACCAAAATTTGCAGA TGTACTGTAG
Upstream 100 bases:
>100_bases TCGTATATAAGTATCTCAATACTGACATTTGTTTGATTACATTTGAGTAAATCTTGGTTAACATTGTTGCTTCATGTCGA ATTCGATGTCATAGCGATAA
Downstream 100 bases:
>100_bases AGCAGCTTAAAGCGTTTAGATTAAACGGGGGACATTTGAATAGCTTTGTCCAATCCTTAGATGACGAGATAGTTTGTGAA TTGCCATTTTAGCACCAGTG
Product: chromosome segregation ATPase
Products: NA
Alternate protein names: Phage Protein; Phage Membrane Protein; Helicase; ATPase; Chromosome Segregation ATPase Phage Origin Coiled-Coil
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MDNSTMTYTLVVAIALLLIVGFLLLRKTSKLSKKLADTEALRSVAESTIEEYKERYSQIFDVEAECEKLKAQLKFDTQKI EETALQTLHEIEQKKAEANAERQSIEEKINELQIDYKSKKATYDSLTKQIAIFNEDIELIELGFYEPKFDFDSSEAFKEE INKCKERQKTLLKEKSSSGAIYCFREWTVDGSRSEGRKMTDKSIRLTARAFNNECEAATANCTWKNVTKMEERINMAFAA INKLNEPNAISITERYLKEKLRELQLTYEYRQKKQREKEEQAEIKAQMREEARIEAEIKRAEDEAIKEEKRYQKALEVAR QELEKASDEMKSELEEQIAQLQANLEEAERKHQRVQSMAEQTKRGHVYIISNIGSFGENIYKIGMTRRLEPMDRVNELGD ASVPFAFDVHAMIYTNDAPTLEKKLHDEFDSHRLNMINRRKEFFNVSLEGIKHAVSKFSEQSVEFIETAVAQDYYETKAM KKQLLVRQGKLELEESYSSKAIPKFADVL
Sequences:
>Translated_509_residues MDNSTMTYTLVVAIALLLIVGFLLLRKTSKLSKKLADTEALRSVAESTIEEYKERYSQIFDVEAECEKLKAQLKFDTQKI EETALQTLHEIEQKKAEANAERQSIEEKINELQIDYKSKKATYDSLTKQIAIFNEDIELIELGFYEPKFDFDSSEAFKEE INKCKERQKTLLKEKSSSGAIYCFREWTVDGSRSEGRKMTDKSIRLTARAFNNECEAATANCTWKNVTKMEERINMAFAA INKLNEPNAISITERYLKEKLRELQLTYEYRQKKQREKEEQAEIKAQMREEARIEAEIKRAEDEAIKEEKRYQKALEVAR QELEKASDEMKSELEEQIAQLQANLEEAERKHQRVQSMAEQTKRGHVYIISNIGSFGENIYKIGMTRRLEPMDRVNELGD ASVPFAFDVHAMIYTNDAPTLEKKLHDEFDSHRLNMINRRKEFFNVSLEGIKHAVSKFSEQSVEFIETAVAQDYYETKAM KKQLLVRQGKLELEESYSSKAIPKFADVL >Mature_509_residues MDNSTMTYTLVVAIALLLIVGFLLLRKTSKLSKKLADTEALRSVAESTIEEYKERYSQIFDVEAECEKLKAQLKFDTQKI EETALQTLHEIEQKKAEANAERQSIEEKINELQIDYKSKKATYDSLTKQIAIFNEDIELIELGFYEPKFDFDSSEAFKEE INKCKERQKTLLKEKSSSGAIYCFREWTVDGSRSEGRKMTDKSIRLTARAFNNECEAATANCTWKNVTKMEERINMAFAA INKLNEPNAISITERYLKEKLRELQLTYEYRQKKQREKEEQAEIKAQMREEARIEAEIKRAEDEAIKEEKRYQKALEVAR QELEKASDEMKSELEEQIAQLQANLEEAERKHQRVQSMAEQTKRGHVYIISNIGSFGENIYKIGMTRRLEPMDRVNELGD ASVPFAFDVHAMIYTNDAPTLEKKLHDEFDSHRLNMINRRKEFFNVSLEGIKHAVSKFSEQSVEFIETAVAQDYYETKAM KKQLLVRQGKLELEESYSSKAIPKFADVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59216; Mature: 59216
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNSTMTYTLVVAIALLLIVGFLLLRKTSKLSKKLADTEALRSVAESTIEEYKERYSQIF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVEAECEKLKAQLKFDTQKIEETALQTLHEIEQKKAEANAERQSIEEKINELQIDYKSKK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ATYDSLTKQIAIFNEDIELIELGFYEPKFDFDSSEAFKEEINKCKERQKTLLKEKSSSGA HHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC IYCFREWTVDGSRSEGRKMTDKSIRLTARAFNNECEAATANCTWKNVTKMEERINMAFAA EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH INKLNEPNAISITERYLKEKLRELQLTYEYRQKKQREKEEQAEIKAQMREEARIEAEIKR HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEDEAIKEEKRYQKALEVARQELEKASDEMKSELEEQIAQLQANLEEAERKHQRVQSMAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTKRGHVYIISNIGSFGENIYKIGMTRRLEPMDRVNELGDASVPFAFDVHAMIYTNDAPT HHHCCCEEEEECCCHHHHHHHHHCCHHCCCHHHHHHHCCCCCCCCEEEEEEEEEECCCCH LEKKLHDEFDSHRLNMINRRKEFFNVSLEGIKHAVSKFSEQSVEFIETAVAQDYYETKAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKQLLVRQGKLELEESYSSKAIPKFADVL HHHHHHHHCCHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure MDNSTMTYTLVVAIALLLIVGFLLLRKTSKLSKKLADTEALRSVAESTIEEYKERYSQIF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVEAECEKLKAQLKFDTQKIEETALQTLHEIEQKKAEANAERQSIEEKINELQIDYKSKK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ATYDSLTKQIAIFNEDIELIELGFYEPKFDFDSSEAFKEEINKCKERQKTLLKEKSSSGA HHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC IYCFREWTVDGSRSEGRKMTDKSIRLTARAFNNECEAATANCTWKNVTKMEERINMAFAA EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH INKLNEPNAISITERYLKEKLRELQLTYEYRQKKQREKEEQAEIKAQMREEARIEAEIKR HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEDEAIKEEKRYQKALEVARQELEKASDEMKSELEEQIAQLQANLEEAERKHQRVQSMAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTKRGHVYIISNIGSFGENIYKIGMTRRLEPMDRVNELGDASVPFAFDVHAMIYTNDAPT HHHCCCEEEEECCCHHHHHHHHHCCHHCCCHHHHHHHCCCCCCCCEEEEEEEEEECCCCH LEKKLHDEFDSHRLNMINRRKEFFNVSLEGIKHAVSKFSEQSVEFIETAVAQDYYETKAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKQLLVRQGKLELEESYSSKAIPKFADVL HHHHHHHHCCHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA