| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968924
Identifier: 113968924
GI number: 113968924
Start: 670966
End: 671304
Strand: Direct
Name: 113968924
Synonym: Shewmr4_0580
Alternate gene names: NA
Gene position: 670966-671304 (Clockwise)
Preceding gene: 113968922
Following gene: 113968925
Centisome position: 14.26
GC content: 50.44
Gene sequence:
>339_bases ATGCCCACCCCAGATAAGGCTTTATTGATCGAGTTGTTAGAGTTTCCGCGTAAGCGAATTTTACAGTCAATGGAGGTGAC CCATTGTCCACACGCGGTCTTTTTTAATGATAGCGATGAGCAGTGTCTCACTTGCCACCAGGGCATGGAATGTATTTGGA TGAACCAGAACGATGAGCTGGTAGCGGTCGAACAAAAATCCGTCGCCGAACTGAAGCAGCAGTTGCTGATCGCCGTCGAT TTTATCGACTCCTCCTTAAGTCCGCACCATTTGTCACGCCGCCAATGTCAGTGTGACAATTGCGTTTGGCTCCGCCGGGT ACAAGCGGCACTGGCTTAG
Upstream 100 bases:
>100_bases ATCAAGTTAAATCGCATGGAGTCTAGGTAATCTTAAGTACATTGGATGGGATACATTTTTGTTAAATTTCCCGTGGACAA AGTGGATTTAAGGAGGGCAT
Downstream 100 bases:
>100_bases TCATTAAGTGTTTACATCTCTATGATTAACTTGCGGTATCTGAGATTTTGCATCCATCCGTTAATGCCATTAGAGTAAGG ATAACTTTAGTCATTTGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPTPDKALLIELLEFPRKRILQSMEVTHCPHAVFFNDSDEQCLTCHQGMECIWMNQNDELVAVEQKSVAELKQQLLIAVD FIDSSLSPHHLSRRQCQCDNCVWLRRVQAALA
Sequences:
>Translated_112_residues MPTPDKALLIELLEFPRKRILQSMEVTHCPHAVFFNDSDEQCLTCHQGMECIWMNQNDELVAVEQKSVAELKQQLLIAVD FIDSSLSPHHLSRRQCQCDNCVWLRRVQAALA >Mature_111_residues PTPDKALLIELLEFPRKRILQSMEVTHCPHAVFFNDSDEQCLTCHQGMECIWMNQNDELVAVEQKSVAELKQQLLIAVDF IDSSLSPHHLSRRQCQCDNCVWLRRVQAALA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12905; Mature: 12774
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPDKALLIELLEFPRKRILQSMEVTHCPHAVFFNDSDEQCLTCHQGMECIWMNQNDEL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCEEEEECCCCCE VAVEQKSVAELKQQLLIAVDFIDSSLSPHHLSRRQCQCDNCVWLRRVQAALA EEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure PTPDKALLIELLEFPRKRILQSMEVTHCPHAVFFNDSDEQCLTCHQGMECIWMNQNDEL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCEEEEECCCCCE VAVEQKSVAELKQQLLIAVDFIDSSLSPHHLSRRQCQCDNCVWLRRVQAALA EEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA