| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968711
Identifier: 113968711
GI number: 113968711
Start: 393929
End: 394222
Strand: Direct
Name: 113968711
Synonym: Shewmr4_0367
Alternate gene names: NA
Gene position: 393929-394222 (Clockwise)
Preceding gene: 113968710
Following gene: 113968712
Centisome position: 8.37
GC content: 45.92
Gene sequence:
>294_bases ATGTCAGTTTCGCGTATAAGGATGTTACGCAGAGTGAGTTTGCGCTTAGTGAGTTCACGTTTATTGATTGGCGGTTTAAT TCTGATCTTAAGTGGTTGTGCCTCGAGCAATATGAACAATACCAGTTGTGATTTTGTGCGAGGCACAGCAGGTAATCAGA GTCAACGCGAGGCCAGCGGTGATGATAGCAATGCCCGGCAGATGGATGTGGGCATTGGGATTTTAACCGCGATCTTCGGC AGTATTAGCCGAGCACTTTCTTCCGATGATAAATCGGATGAGAAGTGTGTTTAA
Upstream 100 bases:
>100_bases CTAGCGGGTAAAGCTTGGCGCATTGGTTTAATGGGCTTTGGTGCCCGCCGTGAGAATGTCGCGCTCTGTTTGCGCGCGCT AGAAGAGGTGCTGAACTAAT
Downstream 100 bases:
>100_bases TCGGTGAGTTTTAGTCGCCTTTGATCCTTTATAAATCCCCGTAATGCGGGGATTTTTTATAAAGACAGTACCGTTCTTTA GTGCTGGGTATATTGATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSVSRIRMLRRVSLRLVSSRLLIGGLILILSGCASSNMNNTSCDFVRGTAGNQSQREASGDDSNARQMDVGIGILTAIFG SISRALSSDDKSDEKCV
Sequences:
>Translated_97_residues MSVSRIRMLRRVSLRLVSSRLLIGGLILILSGCASSNMNNTSCDFVRGTAGNQSQREASGDDSNARQMDVGIGILTAIFG SISRALSSDDKSDEKCV >Mature_96_residues SVSRIRMLRRVSLRLVSSRLLIGGLILILSGCASSNMNNTSCDFVRGTAGNQSQREASGDDSNARQMDVGIGILTAIFGS ISRALSSDDKSDEKCV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10339; Mature: 10208
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSRIRMLRRVSLRLVSSRLLIGGLILILSGCASSNMNNTSCDFVRGTAGNQSQREASG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCC DDSNARQMDVGIGILTAIFGSISRALSSDDKSDEKCV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SVSRIRMLRRVSLRLVSSRLLIGGLILILSGCASSNMNNTSCDFVRGTAGNQSQREASG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCC DDSNARQMDVGIGILTAIFGSISRALSSDDKSDEKCV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA