Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is 113968711

Identifier: 113968711

GI number: 113968711

Start: 393929

End: 394222

Strand: Direct

Name: 113968711

Synonym: Shewmr4_0367

Alternate gene names: NA

Gene position: 393929-394222 (Clockwise)

Preceding gene: 113968710

Following gene: 113968712

Centisome position: 8.37

GC content: 45.92

Gene sequence:

>294_bases
ATGTCAGTTTCGCGTATAAGGATGTTACGCAGAGTGAGTTTGCGCTTAGTGAGTTCACGTTTATTGATTGGCGGTTTAAT
TCTGATCTTAAGTGGTTGTGCCTCGAGCAATATGAACAATACCAGTTGTGATTTTGTGCGAGGCACAGCAGGTAATCAGA
GTCAACGCGAGGCCAGCGGTGATGATAGCAATGCCCGGCAGATGGATGTGGGCATTGGGATTTTAACCGCGATCTTCGGC
AGTATTAGCCGAGCACTTTCTTCCGATGATAAATCGGATGAGAAGTGTGTTTAA

Upstream 100 bases:

>100_bases
CTAGCGGGTAAAGCTTGGCGCATTGGTTTAATGGGCTTTGGTGCCCGCCGTGAGAATGTCGCGCTCTGTTTGCGCGCGCT
AGAAGAGGTGCTGAACTAAT

Downstream 100 bases:

>100_bases
TCGGTGAGTTTTAGTCGCCTTTGATCCTTTATAAATCCCCGTAATGCGGGGATTTTTTATAAAGACAGTACCGTTCTTTA
GTGCTGGGTATATTGATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSVSRIRMLRRVSLRLVSSRLLIGGLILILSGCASSNMNNTSCDFVRGTAGNQSQREASGDDSNARQMDVGIGILTAIFG
SISRALSSDDKSDEKCV

Sequences:

>Translated_97_residues
MSVSRIRMLRRVSLRLVSSRLLIGGLILILSGCASSNMNNTSCDFVRGTAGNQSQREASGDDSNARQMDVGIGILTAIFG
SISRALSSDDKSDEKCV
>Mature_96_residues
SVSRIRMLRRVSLRLVSSRLLIGGLILILSGCASSNMNNTSCDFVRGTAGNQSQREASGDDSNARQMDVGIGILTAIFGS
ISRALSSDDKSDEKCV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10339; Mature: 10208

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSRIRMLRRVSLRLVSSRLLIGGLILILSGCASSNMNNTSCDFVRGTAGNQSQREASG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCC
DDSNARQMDVGIGILTAIFGSISRALSSDDKSDEKCV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SVSRIRMLRRVSLRLVSSRLLIGGLILILSGCASSNMNNTSCDFVRGTAGNQSQREASG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCC
DDSNARQMDVGIGILTAIFGSISRALSSDDKSDEKCV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA