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The map label for this gene is 113968601

Identifier: 113968601

GI number: 113968601

Start: 274640

End: 275197

Strand: Direct

Name: 113968601

Synonym: Shewmr4_0256

Alternate gene names: NA

Gene position: 274640-275197 (Clockwise)

Preceding gene: 113968600

Following gene: 113968609

Centisome position: 5.84

GC content: 42.65

Gene sequence:

>558_bases
ATGAAAAAACTATCTTTAGTTGCGGTAACTTTATTATCTGCATTAGTAGCCGGCCAAGCTTCAGCGGCAACCGATAATAC
TGGGTTTTATGTGGGTGGCGCACTAAACCGTGTAACTGTGGACGCTTTTGATGACTCAGAAACTGGCACAGGTTTTGGTG
TTTACGGTGGTTACAACTTCAACGAGTGGTTTGGTTTAGAAGCCAATTTTTTTGCAACGGCTGATTTGGGTGACAGTGAT
GTCGACATCTCCGCTGGTGCATTAACCTTCACTCCTAAGTTTACGCTGCAAATCAATGATATGTTTTCTGCCTATGCCAA
AGTAGGTGTTGCATCTATGGCTGTGAATGTTGACGGTTTGGGTTTCGATGAAGACTTTACTGGCTTTGGCTGGACGTACG
GCGTTGGTGTTAATGCTGCCGTGACCGAACATTTAAATGTTCGCTTAAGTTACGATATCACCACGGGTGATTTAGACGCC
GATCACAGTTATTTAAATATGAAAGATATCGACACAGATATGAAACAATTAGCAATTGGTGTGCATTACCAGTTCTAA

Upstream 100 bases:

>100_bases
TATAAAACGCATTTAGTCTTTGCAAACTGTAACCCTTATTATTGGTTTGTTGTAATATCCGCAGCGTTTACTACTCAAGT
TAACTCATTAGGAAAATATA

Downstream 100 bases:

>100_bases
TGATTTATACCAAGTCTAAATAATAAAAAAGGGATATGAATATCCCTTTTTTATTATTTACTGGATGATTAATCCATAGA
CAATTCTTTCAATTTTCGCG

Product: OmpA domain-containing protein

Products: NA

Alternate protein names: Outer Membrane Protein; OmpA Domain Protein Transmembrane Region-Containing Protein; OmpA-Like Transmembrane Region

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKKLSLVAVTLLSALVAGQASAATDNTGFYVGGALNRVTVDAFDDSETGTGFGVYGGYNFNEWFGLEANFFATADLGDSD
VDISAGALTFTPKFTLQINDMFSAYAKVGVASMAVNVDGLGFDEDFTGFGWTYGVGVNAAVTEHLNVRLSYDITTGDLDA
DHSYLNMKDIDTDMKQLAIGVHYQF

Sequences:

>Translated_185_residues
MKKLSLVAVTLLSALVAGQASAATDNTGFYVGGALNRVTVDAFDDSETGTGFGVYGGYNFNEWFGLEANFFATADLGDSD
VDISAGALTFTPKFTLQINDMFSAYAKVGVASMAVNVDGLGFDEDFTGFGWTYGVGVNAAVTEHLNVRLSYDITTGDLDA
DHSYLNMKDIDTDMKQLAIGVHYQF
>Mature_185_residues
MKKLSLVAVTLLSALVAGQASAATDNTGFYVGGALNRVTVDAFDDSETGTGFGVYGGYNFNEWFGLEANFFATADLGDSD
VDISAGALTFTPKFTLQINDMFSAYAKVGVASMAVNVDGLGFDEDFTGFGWTYGVGVNAAVTEHLNVRLSYDITTGDLDA
DHSYLNMKDIDTDMKQLAIGVHYQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19729; Mature: 19729

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSLVAVTLLSALVAGQASAATDNTGFYVGGALNRVTVDAFDDSETGTGFGVYGGYNF
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEECCCCC
NEWFGLEANFFATADLGDSDVDISAGALTFTPKFTLQINDMFSAYAKVGVASMAVNVDGL
CCEECCCCCEEEEECCCCCCCEEECCEEEECCEEEEEEHHHHHHHHHHCEEEEEEECCCC
GFDEDFTGFGWTYGVGVNAAVTEHLNVRLSYDITTGDLDADHSYLNMKDIDTDMKQLAIG
CCCCCCCCCCEEECCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEHHHCCCCHHHEEEE
VHYQF
EEECC
>Mature Secondary Structure
MKKLSLVAVTLLSALVAGQASAATDNTGFYVGGALNRVTVDAFDDSETGTGFGVYGGYNF
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEECCCCC
NEWFGLEANFFATADLGDSDVDISAGALTFTPKFTLQINDMFSAYAKVGVASMAVNVDGL
CCEECCCCCEEEEECCCCCCCEEECCEEEECCEEEEEEHHHHHHHHHHCEEEEEEECCCC
GFDEDFTGFGWTYGVGVNAAVTEHLNVRLSYDITTGDLDADHSYLNMKDIDTDMKQLAIG
CCCCCCCCCCEEECCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEHHHCCCCHHHEEEE
VHYQF
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA