Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478386

Identifier: 113478386

GI number: 113478386

Start: 7739867

End: 7740070

Strand: Reverse

Name: 113478386

Synonym: Tery_5071

Alternate gene names: NA

Gene position: 7740070-7739867 (Counterclockwise)

Preceding gene: 113478387

Following gene: 113478385

Centisome position: 99.87

GC content: 32.35

Gene sequence:

>204_bases
TTGCTTGATAAGACTTCAATTGCTAGTTTTTTAGACTTGGAAGATTTACCAGTTTATCACAAAGGTGTCAAATATAGATT
GAGTGGTAAACGAGTGAGAAAAAGACTTTATAAAGCTTCAAATGGTCTCAAATACAATGCTGATGTCAATGGAAGTTTAA
CATATTACGAAAAGCATTCCCAAACGCTTTTAGTAATGGGATAA

Upstream 100 bases:

>100_bases
AATTATAATCTCTCTCTCATGCTATATTTTAAACATAAAATGTGGATTAAAAGTAATATAAAAACGGCAGTTTAGTAAGT
ATTTATACTATAAGAGGTAT

Downstream 100 bases:

>100_bases
TGATAATGGGTGTTGTAGTTCACCCCGTAATGGTTACCCTATATTAAAACTAGGTCAAGGTTTATTTATCTATAGATTTA
GTAACTATATGCTTTTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MLDKTSIASFLDLEDLPVYHKGVKYRLSGKRVRKRLYKASNGLKYNADVNGSLTYYEKHSQTLLVMG

Sequences:

>Translated_67_residues
MLDKTSIASFLDLEDLPVYHKGVKYRLSGKRVRKRLYKASNGLKYNADVNGSLTYYEKHSQTLLVMG
>Mature_67_residues
MLDKTSIASFLDLEDLPVYHKGVKYRLSGKRVRKRLYKASNGLKYNADVNGSLTYYEKHSQTLLVMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7682; Mature: 7682

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKTSIASFLDLEDLPVYHKGVKYRLSGKRVRKRLYKASNGLKYNADVNGSLTYYEKHS
CCCCCCHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEECCCCCCEEEEEECCC
QTLLVMG
CEEEEEC
>Mature Secondary Structure
MLDKTSIASFLDLEDLPVYHKGVKYRLSGKRVRKRLYKASNGLKYNADVNGSLTYYEKHS
CCCCCCHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEECCCCCCEEEEEECCC
QTLLVMG
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA