| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113478349
Identifier: 113478349
GI number: 113478349
Start: 7681269
End: 7681541
Strand: Reverse
Name: 113478349
Synonym: Tery_5025
Alternate gene names: NA
Gene position: 7681541-7681269 (Counterclockwise)
Preceding gene: 113478355
Following gene: 113478346
Centisome position: 99.12
GC content: 33.7
Gene sequence:
>273_bases ATGAAAATTGATATTGATATAATGACTCGCTATTTACACAGAATGCGTAATCAACCAGGATGGGATTTTCTCAATGAGGT TGCTACATCTTTAAATATGGATAGAGCTACATCTAGGCGCTACACAAAAACAGCAGAAGAATGGGAATTAATTGAGCGTC AACAGTTAGAAAATCAACCAACTCAAATTCAAGCAAGTCATAAATTAATGAAATTAGAGCCTGGAGAAGTTAGAAAAATT GTACAGGCAAATTGTCAGGAATTTCAGTTTTAA
Upstream 100 bases:
>100_bases AAAACTCATTCAGATATTACTTTTAACTTGTGACTTATAACTTTTGACTTGTACACGGCGCTATAATTTTAATGATCAAA AATAATCAGGAAAATAGACT
Downstream 100 bases:
>100_bases AGGTTGATATTTTACTGATAAAAATGGGCTCATATTGAGAAGATATTTAATCTGATAATTGCAGAACAGAAGCAACAGAT ATTTATTATACTAAATGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MKIDIDIMTRYLHRMRNQPGWDFLNEVATSLNMDRATSRRYTKTAEEWELIERQQLENQPTQIQASHKLMKLEPGEVRKI VQANCQEFQF
Sequences:
>Translated_90_residues MKIDIDIMTRYLHRMRNQPGWDFLNEVATSLNMDRATSRRYTKTAEEWELIERQQLENQPTQIQASHKLMKLEPGEVRKI VQANCQEFQF >Mature_90_residues MKIDIDIMTRYLHRMRNQPGWDFLNEVATSLNMDRATSRRYTKTAEEWELIERQQLENQPTQIQASHKLMKLEPGEVRKI VQANCQEFQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10826; Mature: 10826
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDIDIMTRYLHRMRNQPGWDFLNEVATSLNMDRATSRRYTKTAEEWELIERQQLENQP CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TQIQASHKLMKLEPGEVRKIVQANCQEFQF CEEHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIDIDIMTRYLHRMRNQPGWDFLNEVATSLNMDRATSRRYTKTAEEWELIERQQLENQP CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TQIQASHKLMKLEPGEVRKIVQANCQEFQF CEEHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA