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The map label for this gene is ldcA [C]

Identifier: 113478336

GI number: 113478336

Start: 7661583

End: 7662482

Strand: Reverse

Name: ldcA [C]

Synonym: Tery_5012

Alternate gene names: 113478336

Gene position: 7662482-7661583 (Counterclockwise)

Preceding gene: 113478337

Following gene: 113478333

Centisome position: 98.87

GC content: 41.33

Gene sequence:

>900_bases
TTGAATCAAAACTATTTAAAACCAGGTGACTTATTACAAGTTATTTCACCCAGTGGCTGTTTGGGAGAGTTGGATGCTTT
CAAAAGAGGATTACAAATTTGGCGATCACATGGCTATCAAGTGGAACTCACTCCTAACTATGACAAGCAGTGGGGTTATT
TAGCAGGTACAGATGAAAGTCGCTGTAGTCAATTAGTGGCAGCTATTAATAATGAAAATTGTCGTGGTATTCTTTGCTCT
AGGGGTGGTTATGGCGCTACTCGTATACTAGAAAACTGGCAAGGCATCAATAATTATTCATCGTCTACTCCTAAATGGTT
GATTGGTTTTTCTGATGTTACAGCTCTACTCTGGACTTTTAGCAAGATGGGCTTTCTCTGCATTCATGGTCCATTATTGG
CTACTTTATCTGCCGAACCAAAGTGGTCAATTAAACGACTATTTGATTTGGTAGAGGGTCGGCCCCTAGAACCTCTAACA
GGAAATGGTTGGGGTGGTGGCCAAGCAAAGGGATATTTAATGCCAGCAAATTTGACTGTAGCTGGTCATTTATTAGGTAC
TAAGTATCAACCAGATTTAACTGGGACAATTTTGGCTTTAGAAGATGTAAATGAAGCTCCTTACCGCATTGACCGAATGT
TGACTCAGTGGCGTATGGCGGGTCTGTTGGAGCAGGTTAAAGGTATTGCTCTCGGGCGGTTTAGTAAGTGTTCCGGTGGA
GTAGTAAATCATACTGAGTTTACTGTTGAGGAAGTATTGCGCGATCGCTTGGTGGATCTAAATATTCCCATTGTTTCTGA
CCTTCCTTTTGGCCATGATAGTCCTAATGCTGCTTTACCTGTGGGAATAGAGGCTAATCTTGATGGAGACAAAGGTATTC
TAGAAATTAAGAGGAATTGA

Upstream 100 bases:

>100_bases
ATACGGTGATTGATGTGATATTATTAATGGGATATATATTTTTTATTTCCTCCTTATTCTCTAATATATACTTTATCAAG
CAGGAAACTGCTATAATATT

Downstream 100 bases:

>100_bases
CATTTTTTCTGGCTGTTAGGTCCAGGGAAACAAGCGATACTTATACTATTTGTCAAAAAAATACTATACCTGATACTGCT
ATCACATAATATATGTAAAA

Product: peptidase U61, LD-carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MNQNYLKPGDLLQVISPSGCLGELDAFKRGLQIWRSHGYQVELTPNYDKQWGYLAGTDESRCSQLVAAINNENCRGILCS
RGGYGATRILENWQGINNYSSSTPKWLIGFSDVTALLWTFSKMGFLCIHGPLLATLSAEPKWSIKRLFDLVEGRPLEPLT
GNGWGGGQAKGYLMPANLTVAGHLLGTKYQPDLTGTILALEDVNEAPYRIDRMLTQWRMAGLLEQVKGIALGRFSKCSGG
VVNHTEFTVEEVLRDRLVDLNIPIVSDLPFGHDSPNAALPVGIEANLDGDKGILEIKRN

Sequences:

>Translated_299_residues
MNQNYLKPGDLLQVISPSGCLGELDAFKRGLQIWRSHGYQVELTPNYDKQWGYLAGTDESRCSQLVAAINNENCRGILCS
RGGYGATRILENWQGINNYSSSTPKWLIGFSDVTALLWTFSKMGFLCIHGPLLATLSAEPKWSIKRLFDLVEGRPLEPLT
GNGWGGGQAKGYLMPANLTVAGHLLGTKYQPDLTGTILALEDVNEAPYRIDRMLTQWRMAGLLEQVKGIALGRFSKCSGG
VVNHTEFTVEEVLRDRLVDLNIPIVSDLPFGHDSPNAALPVGIEANLDGDKGILEIKRN
>Mature_299_residues
MNQNYLKPGDLLQVISPSGCLGELDAFKRGLQIWRSHGYQVELTPNYDKQWGYLAGTDESRCSQLVAAINNENCRGILCS
RGGYGATRILENWQGINNYSSSTPKWLIGFSDVTALLWTFSKMGFLCIHGPLLATLSAEPKWSIKRLFDLVEGRPLEPLT
GNGWGGGQAKGYLMPANLTVAGHLLGTKYQPDLTGTILALEDVNEAPYRIDRMLTQWRMAGLLEQVKGIALGRFSKCSGG
VVNHTEFTVEEVLRDRLVDLNIPIVSDLPFGHDSPNAALPVGIEANLDGDKGILEIKRN

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=293, Percent_Identity=32.0819112627986, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32875; Mature: 32875

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQNYLKPGDLLQVISPSGCLGELDAFKRGLQIWRSHGYQVELTPNYDKQWGYLAGTDES
CCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCHH
RCSQLVAAINNENCRGILCSRGGYGATRILENWQGINNYSSSTPKWLIGFSDVTALLWTF
HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHH
SKMGFLCIHGPLLATLSAEPKWSIKRLFDLVEGRPLEPLTGNGWGGGQAKGYLMPANLTV
HHCCEEEECCHHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEE
AGHLLGTKYQPDLTGTILALEDVNEAPYRIDRMLTQWRMAGLLEQVKGIALGRFSKCSGG
EEHEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VVNHTEFTVEEVLRDRLVDLNIPIVSDLPFGHDSPNAALPVGIEANLDGDKGILEIKRN
CCCCHHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEECC
>Mature Secondary Structure
MNQNYLKPGDLLQVISPSGCLGELDAFKRGLQIWRSHGYQVELTPNYDKQWGYLAGTDES
CCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCHH
RCSQLVAAINNENCRGILCSRGGYGATRILENWQGINNYSSSTPKWLIGFSDVTALLWTF
HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHH
SKMGFLCIHGPLLATLSAEPKWSIKRLFDLVEGRPLEPLTGNGWGGGQAKGYLMPANLTV
HHCCEEEECCHHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEE
AGHLLGTKYQPDLTGTILALEDVNEAPYRIDRMLTQWRMAGLLEQVKGIALGRFSKCSGG
EEHEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VVNHTEFTVEEVLRDRLVDLNIPIVSDLPFGHDSPNAALPVGIEANLDGDKGILEIKRN
CCCCHHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]