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The map label for this gene is crtI [H]

Identifier: 113478302

GI number: 113478302

Start: 7598976

End: 7600523

Strand: Reverse

Name: crtI [H]

Synonym: Tery_4976

Alternate gene names: 113478302

Gene position: 7600523-7598976 (Counterclockwise)

Preceding gene: 113478303

Following gene: 113478300

Centisome position: 98.07

GC content: 42.12

Gene sequence:

>1548_bases
ATGTCTCAAACAGATGTAATTGTAATTGGTAGTGGAATTGGTGGTTTAAGCTGTGCTGCTTTACTAGCGCACTATGGTTT
TGATGTCGTAGTTTGCGAAAGTCATTCTATTGCTGGAGGTGCTGCTCATAGTTTTGAGCGTCAGGGATTTAAATTTGACT
CAGGACCATCTTTACATTCTGGTCTTTCCTATCGCCCTTCTACTAACCCACTAGCACAAGTTTTGGATGCTATCGGTGAG
TCAGTACCCTGTGTAACTTATAAGACTTGGGGTTGTTGTTTACCAGAAGGTAACTTTAATACATCAGTGGGTGCAGACCA
ATTTTGTGATGTTCTCCAAAAGCTGAGAGGTGAAGGTGCTGTAGCAGAGTGGCGTAAACTACAAAAAATTATGGCTCCAC
TAGCAGAAGCAGCGATCGCTCTTCCTCCTGCTTCTGTCCGTTTTGACCTAGGAGCAATAATGACAATGGGGCAATTTCTA
CCTACTATGGCAAAGCACACTTTTAACATTGCTAAGTTAACGGGAGCGTTTTCCGAAATTCTTGAAGAGGTTGTCACAGA
CCCTTTTATCCGAAATTGGTTTGATTTGCTTTGCTTCCTACTTTCAGGCTTGCCAGCAAATGGTACCAGTGCTGCTGAAG
TTGCATTTATGTTTGCTGAATGGTATCGACCGGGAGTTGTACTTGACTATCCTATAGGTGGTAGTGGAGCAATAGTTGAT
GCTTTAGTGAGGGGGTTAAAACGTCATGGCGGTCAACTAATGTTAAATGCTCATGTGGAAGAGATAGTAATTAGAGGTGG
GCGTGCTGTTGGGGTATTGTTGCAGAATGGAGAGGAAATTCGGGCAAAGCAAGCAGTAGTTTCAAATGCTTCTGTCTGGG
ATACTTTGAAATTACTTTCAGAGGATGCTGTTTCAACATCTTGGCGGGAAGAACGACAAGCAACACCAGAATGTAATAGT
TTTATGCACTTACATTTAGGTATTGATGCTACAGATATCAAACCAGATCTATCCTGTCATCATATTATTGTCAATCATTG
GGATCAAATAGATGCGCCCCAAAATGTTGTATTAGTATCTATTCCATCCTTAATAGACTCTACTCTTGCACCCCCAAAAA
AGCACGTTATTCATGTTTATACTCCAGGAAATGAACCATATCAACTATGGCAGGGTATGGATAGAAAGAGTCAAGAATAT
GCACAACAAAAGCAGGAAAGAGCTGAGGTAATGTGGCGAGGGTTAGAGAGAATAATACCTGATATTCGTTCCCGTTGTGA
AGTTAAATTAGTAGGAACTCCCATAACTCACGAACGTTTTCTTCGTCGTCATCGGGGGTCTTATGGTCCGGCAATTCGTG
CTGGGGAGGGGTTATTCCCTGGACCTATAGCATTACCGGGGTTATTATGTTGTGGTGACTCTACTTTTCCTGGTATTGGT
TTACCTGCAGTGGCAGTAAGTGGGATGATAGCAGCAAATACTCTTGCTCCTGTATCGAAGCACAGAGAAATGTTGGAAAG
ATTAGTAATATCAACTCCAGGTAATTAG

Upstream 100 bases:

>100_bases
GTTTAGCACATTTTCTACAAATTTTAGACTTTTGCTGTTATCCTGATCAATAAAACGCTAAATTAAATAATTAACCAAAT
AAAATAATTAACCAAATAAA

Downstream 100 bases:

>100_bases
TTACTGTACCTTTAAGGTTGGGTAGTTCACAATATAATGACAGAAATTACCCAAGGGTGTTTATATAGTCTTAACCCTTA
AGACTATCTCGATATTGCTG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MSQTDVIVIGSGIGGLSCAALLAHYGFDVVVCESHSIAGGAAHSFERQGFKFDSGPSLHSGLSYRPSTNPLAQVLDAIGE
SVPCVTYKTWGCCLPEGNFNTSVGADQFCDVLQKLRGEGAVAEWRKLQKIMAPLAEAAIALPPASVRFDLGAIMTMGQFL
PTMAKHTFNIAKLTGAFSEILEEVVTDPFIRNWFDLLCFLLSGLPANGTSAAEVAFMFAEWYRPGVVLDYPIGGSGAIVD
ALVRGLKRHGGQLMLNAHVEEIVIRGGRAVGVLLQNGEEIRAKQAVVSNASVWDTLKLLSEDAVSTSWREERQATPECNS
FMHLHLGIDATDIKPDLSCHHIIVNHWDQIDAPQNVVLVSIPSLIDSTLAPPKKHVIHVYTPGNEPYQLWQGMDRKSQEY
AQQKQERAEVMWRGLERIIPDIRSRCEVKLVGTPITHERFLRRHRGSYGPAIRAGEGLFPGPIALPGLLCCGDSTFPGIG
LPAVAVSGMIAANTLAPVSKHREMLERLVISTPGN

Sequences:

>Translated_515_residues
MSQTDVIVIGSGIGGLSCAALLAHYGFDVVVCESHSIAGGAAHSFERQGFKFDSGPSLHSGLSYRPSTNPLAQVLDAIGE
SVPCVTYKTWGCCLPEGNFNTSVGADQFCDVLQKLRGEGAVAEWRKLQKIMAPLAEAAIALPPASVRFDLGAIMTMGQFL
PTMAKHTFNIAKLTGAFSEILEEVVTDPFIRNWFDLLCFLLSGLPANGTSAAEVAFMFAEWYRPGVVLDYPIGGSGAIVD
ALVRGLKRHGGQLMLNAHVEEIVIRGGRAVGVLLQNGEEIRAKQAVVSNASVWDTLKLLSEDAVSTSWREERQATPECNS
FMHLHLGIDATDIKPDLSCHHIIVNHWDQIDAPQNVVLVSIPSLIDSTLAPPKKHVIHVYTPGNEPYQLWQGMDRKSQEY
AQQKQERAEVMWRGLERIIPDIRSRCEVKLVGTPITHERFLRRHRGSYGPAIRAGEGLFPGPIALPGLLCCGDSTFPGIG
LPAVAVSGMIAANTLAPVSKHREMLERLVISTPGN
>Mature_514_residues
SQTDVIVIGSGIGGLSCAALLAHYGFDVVVCESHSIAGGAAHSFERQGFKFDSGPSLHSGLSYRPSTNPLAQVLDAIGES
VPCVTYKTWGCCLPEGNFNTSVGADQFCDVLQKLRGEGAVAEWRKLQKIMAPLAEAAIALPPASVRFDLGAIMTMGQFLP
TMAKHTFNIAKLTGAFSEILEEVVTDPFIRNWFDLLCFLLSGLPANGTSAAEVAFMFAEWYRPGVVLDYPIGGSGAIVDA
LVRGLKRHGGQLMLNAHVEEIVIRGGRAVGVLLQNGEEIRAKQAVVSNASVWDTLKLLSEDAVSTSWREERQATPECNSF
MHLHLGIDATDIKPDLSCHHIIVNHWDQIDAPQNVVLVSIPSLIDSTLAPPKKHVIHVYTPGNEPYQLWQGMDRKSQEYA
QQKQERAEVMWRGLERIIPDIRSRCEVKLVGTPITHERFLRRHRGSYGPAIRAGEGLFPGPIALPGLLCCGDSTFPGIGL
PAVAVSGMIAANTLAPVSKHREMLERLVISTPGN

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55841; Mature: 55710

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTDVIVIGSGIGGLSCAALLAHYGFDVVVCESHSIAGGAAHSFERQGFKFDSGPSLHS
CCCCCEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHC
GLSYRPSTNPLAQVLDAIGESVPCVTYKTWGCCLPEGNFNTSVGADQFCDVLQKLRGEGA
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHCCCCC
VAEWRKLQKIMAPLAEAAIALPPASVRFDLGAIMTMGQFLPTMAKHTFNIAKLTGAFSEI
HHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEVVTDPFIRNWFDLLCFLLSGLPANGTSAAEVAFMFAEWYRPGVVLDYPIGGSGAIVD
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH
ALVRGLKRHGGQLMLNAHVEEIVIRGGRAVGVLLQNGEEIRAKQAVVSNASVWDTLKLLS
HHHHHHHHCCCEEEEECCHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHH
EDAVSTSWREERQATPECNSFMHLHLGIDATDIKPDLSCHHIIVNHWDQIDAPQNVVLVS
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEE
IPSLIDSTLAPPKKHVIHVYTPGNEPYQLWQGMDRKSQEYAQQKQERAEVMWRGLERIIP
CHHHHHHHCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DIRSRCEVKLVGTPITHERFLRRHRGSYGPAIRAGEGLFPGPIALPGLLCCGDSTFPGIG
HHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCCC
LPAVAVSGMIAANTLAPVSKHREMLERLVISTPGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SQTDVIVIGSGIGGLSCAALLAHYGFDVVVCESHSIAGGAAHSFERQGFKFDSGPSLHS
CCCCEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHC
GLSYRPSTNPLAQVLDAIGESVPCVTYKTWGCCLPEGNFNTSVGADQFCDVLQKLRGEGA
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHCCCCC
VAEWRKLQKIMAPLAEAAIALPPASVRFDLGAIMTMGQFLPTMAKHTFNIAKLTGAFSEI
HHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEVVTDPFIRNWFDLLCFLLSGLPANGTSAAEVAFMFAEWYRPGVVLDYPIGGSGAIVD
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH
ALVRGLKRHGGQLMLNAHVEEIVIRGGRAVGVLLQNGEEIRAKQAVVSNASVWDTLKLLS
HHHHHHHHCCCEEEEECCHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHH
EDAVSTSWREERQATPECNSFMHLHLGIDATDIKPDLSCHHIIVNHWDQIDAPQNVVLVS
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEE
IPSLIDSTLAPPKKHVIHVYTPGNEPYQLWQGMDRKSQEYAQQKQERAEVMWRGLERIIP
CHHHHHHHCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DIRSRCEVKLVGTPITHERFLRRHRGSYGPAIRAGEGLFPGPIALPGLLCCGDSTFPGIG
HHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCCC
LPAVAVSGMIAANTLAPVSKHREMLERLVISTPGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2263648 [H]