| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113478222
Identifier: 113478222
GI number: 113478222
Start: 7465647
End: 7465841
Strand: Reverse
Name: 113478222
Synonym: Tery_4881
Alternate gene names: NA
Gene position: 7465841-7465647 (Counterclockwise)
Preceding gene: 113478226
Following gene: 113478221
Centisome position: 96.33
GC content: 33.85
Gene sequence:
>195_bases ATGGCAATACAATTGAAAGTTACATCTATTGCTTGTAGTGCATGTGCAGATACTATTACTAAAGCAATTAAAAACTACGA GTCTGAAGCTGATGTCCAAGTGAATATAGGGCAAAAGATAGTTACAGTAGAAACTGAAGCATCTGAAGACTCTATTAAAG AAGTAATTACTTCTGCTGGACATACAGTTGAATAA
Upstream 100 bases:
>100_bases GCTCCTAGAGTCATAAGGCATAGTGGGGTTAGGAAACAATAAGCCCAAATATTATGGTAAATTTGGCTTTTGAGTATGTT ACATAACAAATTTTTTTAAT
Downstream 100 bases:
>100_bases AATTAACTAAGCTATAACTAAAATGTAAACTTGGGGTGTATTTTTCTATCAAACCCCAGGGTTTTTCTTTCCTAGGATAG AGCGGCAAGAAGAGGAGATC
Product: heavy metal transport/detoxification protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MAIQLKVTSIACSACADTITKAIKNYESEADVQVNIGQKIVTVETEASEDSIKEVITSAGHTVE
Sequences:
>Translated_64_residues MAIQLKVTSIACSACADTITKAIKNYESEADVQVNIGQKIVTVETEASEDSIKEVITSAGHTVE >Mature_63_residues AIQLKVTSIACSACADTITKAIKNYESEADVQVNIGQKIVTVETEASEDSIKEVITSAGHTVE
Specific function: Unknown
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6784; Mature: 6652
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQLKVTSIACSACADTITKAIKNYESEADVQVNIGQKIVTVETEASEDSIKEVITSAG CEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHCCC HTVE CCCC >Mature Secondary Structure AIQLKVTSIACSACADTITKAIKNYESEADVQVNIGQKIVTVETEASEDSIKEVITSAG EEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHCCC HTVE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA