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The map label for this gene is 113478201

Identifier: 113478201

GI number: 113478201

Start: 7444411

End: 7444959

Strand: Reverse

Name: 113478201

Synonym: Tery_4852

Alternate gene names: NA

Gene position: 7444959-7444411 (Counterclockwise)

Preceding gene: 113478202

Following gene: 113478199

Centisome position: 96.06

GC content: 37.89

Gene sequence:

>549_bases
TTGATCATCATTGATTCCCAAGCCGTGAAAAATACCTGTAATGCTAGTGTAGACTCAAAGGGTTTCTGTTTCTACAAGTC
GACCAATGGTATTAAAAGGCATCTAGCTGTAGATACATTAGGATTTCCCTTTTTTACTCATTGTACCCGGGCAAATGTCA
CTGATGATGCAGGATTGATTGAAATGTTGAGCTTGAACATTGACTATTTCAAATCCAAGCCAGTGAATATTCCGAAGATT
ACGATTCTCTTAGATCATGGTTATCACCCAGACCACTTGAGAGAGGAATTAGAAAAGATCTATCCACAAATTATGAGAAA
AATTAAGTTTGAACTTTCAACAAAACCTTCAAAACAAGAGAAAGCAGCACAAGGCAAATCAGGATTTGTTCCAGCAATCG
CCAGATGGGTAATTGAACGTTCAAATAGTTGGATGGAAAGATGTAAGATTCTGGTGAAGAACTTTGAGAGAACTCTATCG
AATGCGACGACAAAACTGAATCTTTGCTTTGTCAGACTAATGATTAAGAGACTTGTAGCCTCTGGCTAG

Upstream 100 bases:

>100_bases
TACAAACAATGGCGAGATGCCGGAGTGATTGAGAAACTTATGGATGCTTTACATCCAAGAGTGCGTCAGCAAGTGAAAAA
AAAAGCGCTCCGGGACAACC

Downstream 100 bases:

>100_bases
AGATCTCAAATGGGTTCTATACAATTTACAATCCCTATACCACGGACTACTGTATGCCCATTACCACTGTACTGTCGCCT
AATCAACTCAATTTTATTAC

Product: IS4 family transposase

Products: NA

Alternate protein names: Transposase; ISXo3 Transposase ORF B; LOW QUALITY PROTEIN Transposase; Transposase Is4 Family Protein; Transposase And Inactivated Derivatives-Like Protein; IS4 Family Transposase; Transposase Fragment; Transposase IS5 Family Protein; Transposase Protein

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIIIDSQAVKNTCNASVDSKGFCFYKSTNGIKRHLAVDTLGFPFFTHCTRANVTDDAGLIEMLSLNIDYFKSKPVNIPKI
TILLDHGYHPDHLREELEKIYPQIMRKIKFELSTKPSKQEKAAQGKSGFVPAIARWVIERSNSWMERCKILVKNFERTLS
NATTKLNLCFVRLMIKRLVASG

Sequences:

>Translated_182_residues
MIIIDSQAVKNTCNASVDSKGFCFYKSTNGIKRHLAVDTLGFPFFTHCTRANVTDDAGLIEMLSLNIDYFKSKPVNIPKI
TILLDHGYHPDHLREELEKIYPQIMRKIKFELSTKPSKQEKAAQGKSGFVPAIARWVIERSNSWMERCKILVKNFERTLS
NATTKLNLCFVRLMIKRLVASG
>Mature_182_residues
MIIIDSQAVKNTCNASVDSKGFCFYKSTNGIKRHLAVDTLGFPFFTHCTRANVTDDAGLIEMLSLNIDYFKSKPVNIPKI
TILLDHGYHPDHLREELEKIYPQIMRKIKFELSTKPSKQEKAAQGKSGFVPAIARWVIERSNSWMERCKILVKNFERTLS
NATTKLNLCFVRLMIKRLVASG

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20753; Mature: 20753

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIIDSQAVKNTCNASVDSKGFCFYKSTNGIKRHLAVDTLGFPFFTHCTRANVTDDAGLI
CEEECCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCCHHHH
EMLSLNIDYFKSKPVNIPKITILLDHGYHPDHLREELEKIYPQIMRKIKFELSTKPSKQE
HHHHCCHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KAAQGKSGFVPAIARWVIERSNSWMERCKILVKNFERTLSNATTKLNLCFVRLMIKRLVA
HHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SG
CC
>Mature Secondary Structure
MIIIDSQAVKNTCNASVDSKGFCFYKSTNGIKRHLAVDTLGFPFFTHCTRANVTDDAGLI
CEEECCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCCHHHH
EMLSLNIDYFKSKPVNIPKITILLDHGYHPDHLREELEKIYPQIMRKIKFELSTKPSKQE
HHHHCCHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KAAQGKSGFVPAIARWVIERSNSWMERCKILVKNFERTLSNATTKLNLCFVRLMIKRLVA
HHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA