Click here to switch to the map view.

The map label for this gene is 113478166

Identifier: 113478166

GI number: 113478166

Start: 7385844

End: 7387232

Strand: Reverse

Name: 113478166

Synonym: Tery_4804

Alternate gene names: NA

Gene position: 7387232-7385844 (Counterclockwise)

Preceding gene: 113478168

Following gene: 113478163

Centisome position: 95.32

GC content: 28.73

Gene sequence:

>1389_bases
ATGAATAATTTTGAAACTATCTTAAATTGGGCTGATAATTTGATGTTTAATGAAACTAGAAAAAATCTCTCAGAGGTTCA
GAAAGAAATACTAAAAGGCATTTGGGAAGGAAAAACATATGGTGAAATAGCTAAAGAACTTTATTGCAGCGAATCTAAAG
TGAAAGAAAAAGCTGCTAAATTATTAAAAAAACTCTGTAAAGACTTAGGCTCAGACCTTAATAAGTCTAACTTTCGTTAT
AAGGCAGAGAAAAAATATTGTGTTTCTCAAGATTACAAATCTAACTCGGGTCACTTTTTGTTACAAGTTGATAATTTTAA
TATTGGCGGTCAATTAATACAAAGTGTAGAAGGTGAAAAAGCAAGTTTGCCATATTCTCCTAAAAGTCCTCAAAACAAAA
ATAAATCTCCTATAATTAATCTCAAAGATGCACCGAAATTAACTTGCAATTCTCATCGCACATCAGAAATATCTACCCTC
AAAAAATGGATATTAGAAAGCAACATTCAATTCATAACAATCTACGGATTAAGTGGAATTGGCAAAAGCAATCTTGCTTG
TCAACTTATCGAACATGTTCAAACAGAATTTGACTATATTTTTTGGAAAAGCCTTAATAATTATCCTCATCTTTCAACTA
TAAAAACCGAACTAAAAAAATTTTTTTCCCAATCCCAAACCAAGCTATTATCTACAATTATTGATTATTTTCGTGCTTAT
CGTTGTCTAGTAATTCTTGATGATGTAGAAAATATTTTTCAAAGTGGTGAATTAGCCGGTAAATACCTATTAGACTATAA
AAACTACGGCAATTTTTTTAAACAAATTGCTTCTTTATCTCATCAAAGTTGTGTAATTATCATTAGTTGGGAAAAATCTA
TAGAAATAGCAAGATTAGAAACAGAAAATTATCCAATAAGAACCTTACATCTGAAAGGATTAGAAAAAGAAGAAGCCACA
AAAATATTGAAAACGAAAAAATTAAAAGATGAGGAAAAGTGGTCAGAATTAATAACTATTTATCAAGGTAATCCCACCTG
CTTAAACGTTATAGCTGCAACAATTAGGGAATACTTTTCTGGTAGAGTTTCTCAGTTTTTAGCTGAAATTGAGGAGATTT
ATTTAGGAGATTTTCAACAAACTTTAGAGTATCATTTTGAGCGTTTTAACCCATCAGAAAAAAAAGTAACTTACTGGTTA
TGTAATCAAAATAAACCCATAAATATTTGCCAAATACCTAATAATAATGAATTATCTAAATCAGAATTTTTACAAGTAAT
TGAATCTTTATGTAGACGTAGCTTAGTGGAAAAAAAGGAACTAGACAACAAATATGTATTTGAAATTAATCCTGTATTTA
AACAATATATTCTTACCAAAAATAAATAG

Upstream 100 bases:

>100_bases
TTTTTCAACTATTTGAAATGAATTTAGTACATTTAGTACATTTAGTTGAAAAAGTATATTTCACAGGATATACTGGATAA
ACATTTATTAGTATTTACCT

Downstream 100 bases:

>100_bases
TAATCAAGTGAAGTTATCTTTCATTAAATCAGAGATAATAACGAGAGCTTCTAAAACAGAAATAACCTCTACATCATTCG
CTGAAGCACCTTATTTTACA

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MNNFETILNWADNLMFNETRKNLSEVQKEILKGIWEGKTYGEIAKELYCSESKVKEKAAKLLKKLCKDLGSDLNKSNFRY
KAEKKYCVSQDYKSNSGHFLLQVDNFNIGGQLIQSVEGEKASLPYSPKSPQNKNKSPIINLKDAPKLTCNSHRTSEISTL
KKWILESNIQFITIYGLSGIGKSNLACQLIEHVQTEFDYIFWKSLNNYPHLSTIKTELKKFFSQSQTKLLSTIIDYFRAY
RCLVILDDVENIFQSGELAGKYLLDYKNYGNFFKQIASLSHQSCVIIISWEKSIEIARLETENYPIRTLHLKGLEKEEAT
KILKTKKLKDEEKWSELITIYQGNPTCLNVIAATIREYFSGRVSQFLAEIEEIYLGDFQQTLEYHFERFNPSEKKVTYWL
CNQNKPINICQIPNNNELSKSEFLQVIESLCRRSLVEKKELDNKYVFEINPVFKQYILTKNK

Sequences:

>Translated_462_residues
MNNFETILNWADNLMFNETRKNLSEVQKEILKGIWEGKTYGEIAKELYCSESKVKEKAAKLLKKLCKDLGSDLNKSNFRY
KAEKKYCVSQDYKSNSGHFLLQVDNFNIGGQLIQSVEGEKASLPYSPKSPQNKNKSPIINLKDAPKLTCNSHRTSEISTL
KKWILESNIQFITIYGLSGIGKSNLACQLIEHVQTEFDYIFWKSLNNYPHLSTIKTELKKFFSQSQTKLLSTIIDYFRAY
RCLVILDDVENIFQSGELAGKYLLDYKNYGNFFKQIASLSHQSCVIIISWEKSIEIARLETENYPIRTLHLKGLEKEEAT
KILKTKKLKDEEKWSELITIYQGNPTCLNVIAATIREYFSGRVSQFLAEIEEIYLGDFQQTLEYHFERFNPSEKKVTYWL
CNQNKPINICQIPNNNELSKSEFLQVIESLCRRSLVEKKELDNKYVFEINPVFKQYILTKNK
>Mature_462_residues
MNNFETILNWADNLMFNETRKNLSEVQKEILKGIWEGKTYGEIAKELYCSESKVKEKAAKLLKKLCKDLGSDLNKSNFRY
KAEKKYCVSQDYKSNSGHFLLQVDNFNIGGQLIQSVEGEKASLPYSPKSPQNKNKSPIINLKDAPKLTCNSHRTSEISTL
KKWILESNIQFITIYGLSGIGKSNLACQLIEHVQTEFDYIFWKSLNNYPHLSTIKTELKKFFSQSQTKLLSTIIDYFRAY
RCLVILDDVENIFQSGELAGKYLLDYKNYGNFFKQIASLSHQSCVIIISWEKSIEIARLETENYPIRTLHLKGLEKEEAT
KILKTKKLKDEEKWSELITIYQGNPTCLNVIAATIREYFSGRVSQFLAEIEEIYLGDFQQTLEYHFERFNPSEKKVTYWL
CNQNKPINICQIPNNNELSKSEFLQVIESLCRRSLVEKKELDNKYVFEINPVFKQYILTKNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 53767; Mature: 53767

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFETILNWADNLMFNETRKNLSEVQKEILKGIWEGKTYGEIAKELYCSESKVKEKAAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH
LLKKLCKDLGSDLNKSNFRYKAEKKYCVSQDYKSNSGHFLLQVDNFNIGGQLIQSVEGEK
HHHHHHHHHCCCCCCCCCEEECCCCHHCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCC
ASLPYSPKSPQNKNKSPIINLKDAPKLTCNSHRTSEISTLKKWILESNIQFITIYGLSGI
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
GKSNLACQLIEHVQTEFDYIFWKSLNNYPHLSTIKTELKKFFSQSQTKLLSTIIDYFRAY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCLVILDDVENIFQSGELAGKYLLDYKNYGNFFKQIASLSHQSCVIIISWEKSIEIARLE
HHHEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEE
TENYPIRTLHLKGLEKEEATKILKTKKLKDEEKWSELITIYQGNPTCLNVIAATIREYFS
CCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCHHHHHHHHHHHHHHH
GRVSQFLAEIEEIYLGDFQQTLEYHFERFNPSEKKVTYWLCNQNKPINICQIPNNNELSK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCH
SEFLQVIESLCRRSLVEKKELDNKYVFEINPVFKQYILTKNK
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCC
>Mature Secondary Structure
MNNFETILNWADNLMFNETRKNLSEVQKEILKGIWEGKTYGEIAKELYCSESKVKEKAAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH
LLKKLCKDLGSDLNKSNFRYKAEKKYCVSQDYKSNSGHFLLQVDNFNIGGQLIQSVEGEK
HHHHHHHHHCCCCCCCCCEEECCCCHHCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCC
ASLPYSPKSPQNKNKSPIINLKDAPKLTCNSHRTSEISTLKKWILESNIQFITIYGLSGI
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
GKSNLACQLIEHVQTEFDYIFWKSLNNYPHLSTIKTELKKFFSQSQTKLLSTIIDYFRAY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCLVILDDVENIFQSGELAGKYLLDYKNYGNFFKQIASLSHQSCVIIISWEKSIEIARLE
HHHEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEE
TENYPIRTLHLKGLEKEEATKILKTKKLKDEEKWSELITIYQGNPTCLNVIAATIREYFS
CCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCHHHHHHHHHHHHHHH
GRVSQFLAEIEEIYLGDFQQTLEYHFERFNPSEKKVTYWLCNQNKPINICQIPNNNELSK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCH
SEFLQVIESLCRRSLVEKKELDNKYVFEINPVFKQYILTKNK
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]