| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113478119
Identifier: 113478119
GI number: 113478119
Start: 7288334
End: 7288429
Strand: Reverse
Name: 113478119
Synonym: Tery_4751
Alternate gene names: NA
Gene position: 7288429-7288334 (Counterclockwise)
Preceding gene: 113478120
Following gene: 113478118
Centisome position: 94.04
GC content: 34.38
Gene sequence:
>96_bases GTGTGGTCAAAAAGAGGGAAAAAAATTTCTGGAGATAGGCAAGGAAAGAGGGGAAAAAGAGAAAATTTAGTCCCTGGTAG AAGAAAAATAAAATAA
Upstream 100 bases:
>100_bases GAAATTAATCAAAATATATGGAAGTAAAAGTTTAGTATTTGTTTTGGAGTCAGGATTTGAATGATTTCTAAATTGTATTT ATGTGTGATCAAAAGTTGAT
Downstream 100 bases:
>100_bases AGATTTAATCCCACCAATGATATTCACGGGAAGTTTGAATGCAGAAGGTTTTGAAGGCTGGTTATATAAAGATATTTATT ACTATCATTAACCATCACAT
Product: IS630 family transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 31; Mature: 31
Protein sequence:
>31_residues MWSKRGKKISGDRQGKRGKRENLVPGRRKIK
Sequences:
>Translated_31_residues MWSKRGKKISGDRQGKRGKRENLVPGRRKIK >Mature_31_residues MWSKRGKKISGDRQGKRGKRENLVPGRRKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3651; Mature: 3651
Theoretical pI: Translated: 12.54; Mature: 12.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSKRGKKISGDRQGKRGKRENLVPGRRKIK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MWSKRGKKISGDRQGKRGKRENLVPGRRKIK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA