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The map label for this gene is hgiDIIM [H]

Identifier: 113478056

GI number: 113478056

Start: 7192816

End: 7193853

Strand: Reverse

Name: hgiDIIM [H]

Synonym: Tery_4678

Alternate gene names: 113478056

Gene position: 7193853-7192816 (Counterclockwise)

Preceding gene: 113478059

Following gene: 113478053

Centisome position: 92.82

GC content: 37.86

Gene sequence:

>1038_bases
ATGATTGGCATTTCTGCGATAGACTTATTTTGCGGAGCAGGTGGGTTAACTCATGGCTTTGAGAAAGCTGGTCTTCCTGT
AAATGTTGGTTATGATATTGATCCCGTATGTAAGTTTCCTTATGAGTATAACAATAAAGCCAAGTTTATACTAAAAAGCG
TTGAAGACATTGAGAGTATGGAGCTAGCAAAGCATTTTCCAATATGTCACCTTAAAGTTTTAGCCGGATGCTCTCCATGC
CAACCATTTTCTAATTACTCCAAGCGCTACAGAAACAGCTCCTCAAAATGGAAGCTTCTCTATTATTTTGCCCGTCTTAT
CAAACAATGTATGCCAGATATTGTGACTATGGAAAATGTACCACAGTTGCAACAAAATCAAGTTTTTGAGGAATTTATTA
CTAAACTCAAAAAGTTCAAATACTTCATCACATTTTATCGTGTTAACTGTCAAGACTACGGTATACCTCAAAATCGTAAA
CGGTTAGTACTTTTTGCCTCCAAGTTTGGCAATATAGATTTAATTCCCCCAAATTGCGATCAGGATAATTACAAAACTGT
ACGAAAGACTATTGAGCATCTTGAAGCTCTGAGTGCAGGTCAATCATCGAAAATAGATCCACTTCATCAATGTAGCAAAC
TTTCAGCACTGAATCTACGTCGTATTCGTGCTTCTAAACCAGGAGGCACTTGGCGAGACTGGCCCAAAAACTTAATAGCT
AAATGCCATACTAAGAGTAGTGGTAAATCATATCCATCGGTTTACGGCAGGATGGAATGGGATAGTCCCAGTCCAACTAT
AACGACTCAGTGCTTTGGTTTTGGTAATGGTCGATTTGGACACCCCGAACAAGATAGAGCCATATCCCTCAGAGAAGCAG
CATTGTTGCAAACTTTTCCTCATAAATACCAATTTTTTCCTCCTAATAAATCATTTGTTTTTACAGATATAGGGCGTTTA
ATTGGGAATGCTGTCCCTGTAAAGTTAGGTCAAGTAGTAGCAAAAAGTATTCTTAAACATGTTCAAGAAATAAGTTAG

Upstream 100 bases:

>100_bases
CAGTTTTCTAATTACCTTCCCTCTTATTTGAACTTGAAATTAGTAACTTGATTGAATTATAATTTAAGCCTGACTTATAT
AAAATCTGTAGAGGTAAATA

Downstream 100 bases:

>100_bases
GGAGTATTTGTTGAGTCTAAGTATTCCTCATTATCTATATATGTTTCAATATTCTCCAATATTCCTTTTAAATATTCGAC
TATTGTCTTTTTAATTTCTA

Product: DNA-cytosine methyltransferase

Products: NA

Alternate protein names: M.HgiDII; Cytosine-specific methyltransferase HgiDII [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MIGISAIDLFCGAGGLTHGFEKAGLPVNVGYDIDPVCKFPYEYNNKAKFILKSVEDIESMELAKHFPICHLKVLAGCSPC
QPFSNYSKRYRNSSSKWKLLYYFARLIKQCMPDIVTMENVPQLQQNQVFEEFITKLKKFKYFITFYRVNCQDYGIPQNRK
RLVLFASKFGNIDLIPPNCDQDNYKTVRKTIEHLEALSAGQSSKIDPLHQCSKLSALNLRRIRASKPGGTWRDWPKNLIA
KCHTKSSGKSYPSVYGRMEWDSPSPTITTQCFGFGNGRFGHPEQDRAISLREAALLQTFPHKYQFFPPNKSFVFTDIGRL
IGNAVPVKLGQVVAKSILKHVQEIS

Sequences:

>Translated_345_residues
MIGISAIDLFCGAGGLTHGFEKAGLPVNVGYDIDPVCKFPYEYNNKAKFILKSVEDIESMELAKHFPICHLKVLAGCSPC
QPFSNYSKRYRNSSSKWKLLYYFARLIKQCMPDIVTMENVPQLQQNQVFEEFITKLKKFKYFITFYRVNCQDYGIPQNRK
RLVLFASKFGNIDLIPPNCDQDNYKTVRKTIEHLEALSAGQSSKIDPLHQCSKLSALNLRRIRASKPGGTWRDWPKNLIA
KCHTKSSGKSYPSVYGRMEWDSPSPTITTQCFGFGNGRFGHPEQDRAISLREAALLQTFPHKYQFFPPNKSFVFTDIGRL
IGNAVPVKLGQVVAKSILKHVQEIS
>Mature_345_residues
MIGISAIDLFCGAGGLTHGFEKAGLPVNVGYDIDPVCKFPYEYNNKAKFILKSVEDIESMELAKHFPICHLKVLAGCSPC
QPFSNYSKRYRNSSSKWKLLYYFARLIKQCMPDIVTMENVPQLQQNQVFEEFITKLKKFKYFITFYRVNCQDYGIPQNRK
RLVLFASKFGNIDLIPPNCDQDNYKTVRKTIEHLEALSAGQSSKIDPLHQCSKLSALNLRRIRASKPGGTWRDWPKNLIA
KCHTKSSGKSYPSVYGRMEWDSPSPTITTQCFGFGNGRFGHPEQDRAISLREAALLQTFPHKYQFFPPNKSFVFTDIGRL
IGNAVPVKLGQVVAKSILKHVQEIS

Specific function: This methylase recognizes the double-stranded sequence GTCGAC, causes specific methylation on C-? on both strands and protects the DNA from cleavage by the HgiDII endonuclease [H]

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the C5-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018117
- InterPro:   IPR001525 [H]

Pfam domain/function: PF00145 DNA_methylase [H]

EC number: =2.1.1.37 [H]

Molecular weight: Translated: 39238; Mature: 39238

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00094 C5_MTASE_1 ; PS00095 C5_MTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGISAIDLFCGAGGLTHGFEKAGLPVNVGYDIDPVCKFPYEYNNKAKFILKSVEDIESM
CCCCHHHHHHHCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ELAKHFPICHLKVLAGCSPCQPFSNYSKRYRNSSSKWKLLYYFARLIKQCMPDIVTMENV
HHHHHCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PQLQQNQVFEEFITKLKKFKYFITFYRVNCQDYGIPQNRKRLVLFASKFGNIDLIPPNCD
CCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHCCCCCCCCEEEEEEECCCCEEECCCCCC
QDNYKTVRKTIEHLEALSAGQSSKIDPLHQCSKLSALNLRRIRASKPGGTWRDWPKNLIA
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KCHTKSSGKSYPSVYGRMEWDSPSPTITTQCFGFGNGRFGHPEQDRAISLREAALLQTFP
HHCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
HKYQFFPPNKSFVFTDIGRLIGNAVPVKLGQVVAKSILKHVQEIS
CCEEECCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGISAIDLFCGAGGLTHGFEKAGLPVNVGYDIDPVCKFPYEYNNKAKFILKSVEDIESM
CCCCHHHHHHHCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ELAKHFPICHLKVLAGCSPCQPFSNYSKRYRNSSSKWKLLYYFARLIKQCMPDIVTMENV
HHHHHCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PQLQQNQVFEEFITKLKKFKYFITFYRVNCQDYGIPQNRKRLVLFASKFGNIDLIPPNCD
CCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHCCCCCCCCEEEEEEECCCCEEECCCCCC
QDNYKTVRKTIEHLEALSAGQSSKIDPLHQCSKLSALNLRRIRASKPGGTWRDWPKNLIA
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KCHTKSSGKSYPSVYGRMEWDSPSPTITTQCFGFGNGRFGHPEQDRAISLREAALLQTFP
HHCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
HKYQFFPPNKSFVFTDIGRLIGNAVPVKLGQVVAKSILKHVQEIS
CCEEECCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1937045; 7607523 [H]