| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is psaA
Identifier: 113478049
GI number: 113478049
Start: 7178626
End: 7180887
Strand: Reverse
Name: psaA
Synonym: Tery_4669
Alternate gene names: 113478049
Gene position: 7180887-7178626 (Counterclockwise)
Preceding gene: 113478051
Following gene: 113478048
Centisome position: 92.66
GC content: 43.55
Gene sequence:
>2262_bases ATGACCATAAGTCCTCCAGAGCGTGAGGCAAAAGTAAGAGTAACTGTTGATACTGACCCTGTACCTACTTCTTTTGAAAA GTGGGGGAAACCTGGTCACTTCAGTCGGTCTCTAGCCAGAGGACCAAAAACCACTACCTGGATTTGGAACCTCCATGCTG ACGCTCACGACTTTGATAGTCACACTTCTGATTTAGAAGATGTATCGCGCAAAATCTTCAGCGCACACTTTGGTCACCTG GCCATAATCTTTGTCTGGTTGAGTGGCGCATATTTTCATGGCGCTAAATTTTCCAACTATGAAGCTTGGTTAGCAGACCC TACAGGAATTAAACCAAGTGCTCAAGTTGTATGGCCAGTTTTAGGCCAGGGCATCTTAAATGGTGATATGGGTGGTGGTT TCCATGGCATCCAAATTACTTCCGGATTATTCCAATTATGGCGCGCTTCTGGCATCACTAATGAGTACCAACTATACTGC ACGGCTATCGGTGGCTTAGTAATGGCAGCCCTGATGATGTTTGCAGGTTGGTTCCATTATCATAAGAAAGCACCGAAATT GGAATGGTTCCAGAATGTGGAATCAATGATGAACCATCACTTAGCAGGCTTACTAGGTTTAGGTTGCCTGTCTTGGGCAG GCCACCAGATTCATGTTTCTTTGCCTATTAATAAGTTATTAGATTCTGGGGTAGCACCAGAGGATATTCCTCTACCTCAT GAATTTCTATTTAATAAAAGCTTGATGGCAGAGTTGTACCCTAGTTTTGCCAAAGGTTTAACCCCATTCTTTACATTGAA TTGGGGTGAATATGCTGATTTCCTGACCTTTAAAGGTGGTTTAAACCCTGTAACAGGTGGCTTGTGGTTATCTGATACAG CTCATCATCATTTAGCACTAGCAGTATTATTCATAGTTGCTGGCCATATGTACCGGACAAATTGGGGCATTGGTCACAGC ATGAAAGAAATTTTAGAAGCTCATAAAGATCCACTCATAATTGGTGGTGAAGGTCATAAAGGTCTATATGAAGCTTTAAC AACTTCCTGGCACGCCCAGTTAGCAATTAACTTGGCTATGCTAGGATCTCTTAGCATCATTGTGGCACATCACATGTATG CAATGCCACCGTATCCCTATATTGCGACTGACTACCCAACTCAGTTATCTCTGTTCACTCACCATATGTGGATTGGAGGA TTCCTGATTGTGGGAGCTGGAGCTCATGGTGCTATTTTTATGGTGCGGGATTATGATCCAGCAAAGAATGTTAACAACGT GTTGGATCGAGTCATTCGTCACCGGGATGCAATTATCTCTCACCTGAACTGGGTTTGTATTTTCCTGGGCTTCCATAGCT TCGGATTATACGTTCATAATGATACTCTGCGGGCTTTAGGTCGTCCCCAGGATATGTTCTCTGATACTGGTATTCAACTA CAGCCAATCTTTGCTCAGTGGGTACAAAATCTTCATAGTTTAGCTCCTGGCAATACTGCTCCTAATGCTTTAGCATCCGT CAGCCCAATTTTTGGTGGCGATGTATTAGCAGTAGGTGGCAAAGTGGCAATGATGCCAATGACCTTGGGTACGGCGGACT TTATGGTGCACCATATCCATGCCTTTACAATCCATGTTACAGCCCTGATTCTTCTTAAAGGTGTACTGTATGCTCGTAAC TCTCGACTAATTCCAGATAAGAGTGAACTAGGCTTCCGATTCCCTTGTGATGGTCCTGGTCGTGGTGGTACTTGTCAAGT TTCTGGTTGGGACCATGTATTCTTGGGTCTTTTCTGGATGTATAATTCACTGTCAATTGTGATTTTTCACTTTAGTTGGA AGATGCAGTCAGATGTCTGGGGAACAGTAGATCCAGATGGTACAGTGAGTCACATTACTTACGGCAACTTTGCCCAAAGT GCAGTTACTATCAATGGTTGGTTGCGTGACTTCTTGTGGGCACAAGCTTCAAACGTAATTACATCATACGGTTCAGAATT ATCTGCATACGGTTTGTTATTCCTTGGCGCACACTTTATTTGGGCATTTAGCTTAATGTTCTTGTTTAGTGGTCGTGGGT ACTGGCAAGAGTTGATAGAGTCTATAGTTTGGGCTCATAATAAGTTAAAGGTTGCTCCAGCAATTCAGCCTCGTGCTTTA AGCATAACCCAGGGTAGAGCAGTAGGAGTAGCTCATTATCTCCTCGGCGGAATTGTCACAACCTGGGCATTCTTCCTAGC TCGAATAATTGCAGTAGGATAG
Upstream 100 bases:
>100_bases TCTGTAAACTTGCAAAAGATATTGATAATTCTTTACAACTTTTATCAGCTTCTACAACATCAATAATTTAGTTAATTGTC TTTGGGAGAGGAGAGTCTTC
Downstream 100 bases:
>100_bases AATGCAATAGCATATTAAGATTCTTCCTTGGGGATTGACTTATCCTCAATCCCCAACTTAATCTTTCAAGGGGTCTCCCG TTATAAAGTACTAGTAAAAA
Product: photosystem I P700 chlorophyll a apoprotein A1
Products: NA
Alternate protein names: PsaA
Number of amino acids: Translated: 753; Mature: 752
Protein sequence:
>753_residues MTISPPEREAKVRVTVDTDPVPTSFEKWGKPGHFSRSLARGPKTTTWIWNLHADAHDFDSHTSDLEDVSRKIFSAHFGHL AIIFVWLSGAYFHGAKFSNYEAWLADPTGIKPSAQVVWPVLGQGILNGDMGGGFHGIQITSGLFQLWRASGITNEYQLYC TAIGGLVMAALMMFAGWFHYHKKAPKLEWFQNVESMMNHHLAGLLGLGCLSWAGHQIHVSLPINKLLDSGVAPEDIPLPH EFLFNKSLMAELYPSFAKGLTPFFTLNWGEYADFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHS MKEILEAHKDPLIIGGEGHKGLYEALTTSWHAQLAINLAMLGSLSIIVAHHMYAMPPYPYIATDYPTQLSLFTHHMWIGG FLIVGAGAHGAIFMVRDYDPAKNVNNVLDRVIRHRDAIISHLNWVCIFLGFHSFGLYVHNDTLRALGRPQDMFSDTGIQL QPIFAQWVQNLHSLAPGNTAPNALASVSPIFGGDVLAVGGKVAMMPMTLGTADFMVHHIHAFTIHVTALILLKGVLYARN SRLIPDKSELGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNSLSIVIFHFSWKMQSDVWGTVDPDGTVSHITYGNFAQS AVTINGWLRDFLWAQASNVITSYGSELSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRAL SITQGRAVGVAHYLLGGIVTTWAFFLARIIAVG
Sequences:
>Translated_753_residues MTISPPEREAKVRVTVDTDPVPTSFEKWGKPGHFSRSLARGPKTTTWIWNLHADAHDFDSHTSDLEDVSRKIFSAHFGHL AIIFVWLSGAYFHGAKFSNYEAWLADPTGIKPSAQVVWPVLGQGILNGDMGGGFHGIQITSGLFQLWRASGITNEYQLYC TAIGGLVMAALMMFAGWFHYHKKAPKLEWFQNVESMMNHHLAGLLGLGCLSWAGHQIHVSLPINKLLDSGVAPEDIPLPH EFLFNKSLMAELYPSFAKGLTPFFTLNWGEYADFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHS MKEILEAHKDPLIIGGEGHKGLYEALTTSWHAQLAINLAMLGSLSIIVAHHMYAMPPYPYIATDYPTQLSLFTHHMWIGG FLIVGAGAHGAIFMVRDYDPAKNVNNVLDRVIRHRDAIISHLNWVCIFLGFHSFGLYVHNDTLRALGRPQDMFSDTGIQL QPIFAQWVQNLHSLAPGNTAPNALASVSPIFGGDVLAVGGKVAMMPMTLGTADFMVHHIHAFTIHVTALILLKGVLYARN SRLIPDKSELGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNSLSIVIFHFSWKMQSDVWGTVDPDGTVSHITYGNFAQS AVTINGWLRDFLWAQASNVITSYGSELSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRAL SITQGRAVGVAHYLLGGIVTTWAFFLARIIAVG >Mature_752_residues TISPPEREAKVRVTVDTDPVPTSFEKWGKPGHFSRSLARGPKTTTWIWNLHADAHDFDSHTSDLEDVSRKIFSAHFGHLA IIFVWLSGAYFHGAKFSNYEAWLADPTGIKPSAQVVWPVLGQGILNGDMGGGFHGIQITSGLFQLWRASGITNEYQLYCT AIGGLVMAALMMFAGWFHYHKKAPKLEWFQNVESMMNHHLAGLLGLGCLSWAGHQIHVSLPINKLLDSGVAPEDIPLPHE FLFNKSLMAELYPSFAKGLTPFFTLNWGEYADFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSM KEILEAHKDPLIIGGEGHKGLYEALTTSWHAQLAINLAMLGSLSIIVAHHMYAMPPYPYIATDYPTQLSLFTHHMWIGGF LIVGAGAHGAIFMVRDYDPAKNVNNVLDRVIRHRDAIISHLNWVCIFLGFHSFGLYVHNDTLRALGRPQDMFSDTGIQLQ PIFAQWVQNLHSLAPGNTAPNALASVSPIFGGDVLAVGGKVAMMPMTLGTADFMVHHIHAFTIHVTALILLKGVLYARNS RLIPDKSELGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNSLSIVIFHFSWKMQSDVWGTVDPDGTVSHITYGNFAQSA VTINGWLRDFLWAQASNVITSYGSELSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALS ITQGRAVGVAHYLLGGIVTTWAFFLARIIAVG
Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaA/psaB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAA_TRIEI (Q10VT7)
Other databases:
- EMBL: CP000393 - RefSeq: YP_724110.1 - ProteinModelPortal: Q10VT7 - SMR: Q10VT7 - STRING: Q10VT7 - GeneID: 4246323 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_4669 - NMPDR: fig|203124.1.peg.4401 - eggNOG: NOG05023 - HOGENOM: HBG284930 - OMA: FSAHFGH - ProtClustDB: PRK13200 - BioCyc: TERY203124:TERY_4669-MONOMER - GO: GO:0015979 - GO: GO:0006810 - HAMAP: MF_00458 - InterPro: IPR006243 - InterPro: IPR001280 - InterPro: IPR020586 - Gene3D: G3DSA:1.20.1130.10 - PIRSF: PIRSF002905 - PRINTS: PR00257 - TIGRFAMs: TIGR01335
Pfam domain/function: PF00223 PsaA_PsaB
EC number: NA
Molecular weight: Translated: 83322; Mature: 83191
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00419 PHOTOSYSTEM_I_PSAAB
Important sites: BINDING 694-694 BINDING 695-695
Signals:
None
Transmembrane regions:
HASH(0x1c1150f4)-; HASH(0x1aa7c4cc)-; HASH(0x4051f578)-; HASH(0x1a675cb4)-; HASH(0x1bb33140)-; HASH(0x19642300)-; HASH(0x1c5f3ccc)-; HASH(0x18477b18)-; HASH(0x1a626360)-; HASH(0x1bab25a8)-; HASH(0x1bb37fb8)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISPPEREAKVRVTVDTDPVPTSFEKWGKPGHFSRSLARGPKTTTWIWNLHADAHDFDS CCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCC HTSDLEDVSRKIFSAHFGHLAIIFVWLSGAYFHGAKFSNYEAWLADPTGIKPSAQVVWPV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEHHHH LGQGILNGDMGGGFHGIQITSGLFQLWRASGITNEYQLYCTAIGGLVMAALMMFAGWFHY HCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH HKKAPKLEWFQNVESMMNHHLAGLLGLGCLSWAGHQIHVSLPINKLLDSGVAPEDIPLPH HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCH EFLFNKSLMAELYPSFAKGLTPFFTLNWGEYADFLTFKGGLNPVTGGLWLSDTAHHHLAL HHHHCHHHHHHHHHHHHCCCCCEEEECCHHHHHHEEECCCCCCCCCCEEECCCCHHHHHH AVLFIVAGHMYRTNWGIGHSMKEILEAHKDPLIIGGEGHKGLYEALTTSWHAQLAINLAM HHHHHHHCCCEECCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCHHHHHHHHHHH LGSLSIIVAHHMYAMPPYPYIATDYPTQLSLFTHHMWIGGFLIVGAGAHGAIFMVRDYDP HHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCC AKNVNNVLDRVIRHRDAIISHLNWVCIFLGFHSFGLYVHNDTLRALGRPQDMFSDTGIQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHCCCCHHHHCCCCCEE QPIFAQWVQNLHSLAPGNTAPNALASVSPIFGGDVLAVGGKVAMMPMTLGTADFMVHHIH EHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEECCEEEEEEEECCHHHHHHHHHH AFTIHVTALILLKGVLYARNSRLIPDKSELGFRFPCDGPGRGGTCQVSGWDHVFLGLFWM HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCCCCCCCCEEEECCCCHHHHHHHHH YNSLSIVIFHFSWKMQSDVWGTVDPDGTVSHITYGNFAQSAVTINGWLRDFLWAQASNVI HCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCHHCCEEEHHHHHHHHHHHHHHHHH TSYGSELSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRAL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCEE SITQGRAVGVAHYLLGGIVTTWAFFLARIIAVG EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure TISPPEREAKVRVTVDTDPVPTSFEKWGKPGHFSRSLARGPKTTTWIWNLHADAHDFDS CCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCC HTSDLEDVSRKIFSAHFGHLAIIFVWLSGAYFHGAKFSNYEAWLADPTGIKPSAQVVWPV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEHHHH LGQGILNGDMGGGFHGIQITSGLFQLWRASGITNEYQLYCTAIGGLVMAALMMFAGWFHY HCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH HKKAPKLEWFQNVESMMNHHLAGLLGLGCLSWAGHQIHVSLPINKLLDSGVAPEDIPLPH HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCH EFLFNKSLMAELYPSFAKGLTPFFTLNWGEYADFLTFKGGLNPVTGGLWLSDTAHHHLAL HHHHCHHHHHHHHHHHHCCCCCEEEECCHHHHHHEEECCCCCCCCCCEEECCCCHHHHHH AVLFIVAGHMYRTNWGIGHSMKEILEAHKDPLIIGGEGHKGLYEALTTSWHAQLAINLAM HHHHHHHCCCEECCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCHHHHHHHHHHH LGSLSIIVAHHMYAMPPYPYIATDYPTQLSLFTHHMWIGGFLIVGAGAHGAIFMVRDYDP HHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCC AKNVNNVLDRVIRHRDAIISHLNWVCIFLGFHSFGLYVHNDTLRALGRPQDMFSDTGIQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHCCCCHHHHCCCCCEE QPIFAQWVQNLHSLAPGNTAPNALASVSPIFGGDVLAVGGKVAMMPMTLGTADFMVHHIH EHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEECCEEEEEEEECCHHHHHHHHHH AFTIHVTALILLKGVLYARNSRLIPDKSELGFRFPCDGPGRGGTCQVSGWDHVFLGLFWM HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCCCCCCCCEEEECCCCHHHHHHHHH YNSLSIVIFHFSWKMQSDVWGTVDPDGTVSHITYGNFAQSAVTINGWLRDFLWAQASNVI HCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCHHCCEEEHHHHHHHHHHHHHHHHH TSYGSELSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRAL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCEE SITQGRAVGVAHYLLGGIVTTWAFFLARIIAVG EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA