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The map label for this gene is nrdR

Identifier: 113478044

GI number: 113478044

Start: 7172676

End: 7173203

Strand: Reverse

Name: nrdR

Synonym: Tery_4664

Alternate gene names: 113478044

Gene position: 7173203-7172676 (Counterclockwise)

Preceding gene: 113478045

Following gene: 113478043

Centisome position: 92.56

GC content: 35.61

Gene sequence:

>528_bases
ATGCTATGTCCAATTTGCCAAGATACAAATAGTCGTGTTCTAGAATCTCGTTCAGCTGAATCTGGCAAGAGCATCCGACG
TCGGCGAGAATGTATGAATTGCCAGCATCGTTTCACTACTTATGAGAGAATAGAGTTTCTGACAATAACAATAATTAAAA
GGGATGGAAAAAAGGAGTCTTTTGACAAGTCGAAATTACTTCGAGGTATTATTCGTTCCTGTGAAAAAACTGGTATTGAA
GTTAGTCAGCTTGAAGCTTTTGTCAATCAAATAGAGGTTGAATTACAAGGTAAATGCCAGAGAGAAATTACTAGTGCTGA
GATTGGTGAAATTGTTCTTAGCAAATTGAGTGGCATTAGTGAAGTTGCCTATATCCGTTTCGCTTCTGTTTATCGTAAAT
TTCAAGGTATTCGAGATTTTGTAGATACCTTAAATCATCTGCAAAATCAAAAAGAGAATTTAGAGTTTACTGCGACTGTG
CCACAAAATTCTGAAATTTCTCTACAACAAGATGTAATTAATGTGTAA

Upstream 100 bases:

>100_bases
GCTGAGTTTGATCCCAGCATTCATATCTATTACCTGTATTTAGTGGCCATCACCCCAAATAGGGGAAATTTATTCATGTA
TTGTATGAAAAATTTAAAGT

Downstream 100 bases:

>100_bases
AACAGCTAAAGTTATAAATTAAATTCTTGCTTTGACTATATTTTACAATTTGGGAATGTCCTAAAAGTTATAGCGACTGT
ATGGTAAAAAAGTTTTAACA

Product: ribonucleotide reductase regulator NrdR-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLCPICQDTNSRVLESRSAESGKSIRRRRECMNCQHRFTTYERIEFLTITIIKRDGKKESFDKSKLLRGIIRSCEKTGIE
VSQLEAFVNQIEVELQGKCQREITSAEIGEIVLSKLSGISEVAYIRFASVYRKFQGIRDFVDTLNHLQNQKENLEFTATV
PQNSEISLQQDVINV

Sequences:

>Translated_175_residues
MLCPICQDTNSRVLESRSAESGKSIRRRRECMNCQHRFTTYERIEFLTITIIKRDGKKESFDKSKLLRGIIRSCEKTGIE
VSQLEAFVNQIEVELQGKCQREITSAEIGEIVLSKLSGISEVAYIRFASVYRKFQGIRDFVDTLNHLQNQKENLEFTATV
PQNSEISLQQDVINV
>Mature_175_residues
MLCPICQDTNSRVLESRSAESGKSIRRRRECMNCQHRFTTYERIEFLTITIIKRDGKKESFDKSKLLRGIIRSCEKTGIE
VSQLEAFVNQIEVELQGKCQREITSAEIGEIVLSKLSGISEVAYIRFASVYRKFQGIRDFVDTLNHLQNQKENLEFTATV
PQNSEISLQQDVINV

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=149, Percent_Identity=37.5838926174497, Blast_Score=122, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_TRIEI (Q10VU2)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_724105.1
- STRING:   Q10VU2
- GeneID:   4246318
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_4664
- NMPDR:   fig|203124.1.peg.4397
- eggNOG:   COG1327
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- PhylomeDB:   Q10VU2
- BioCyc:   TERY203124:TERY_4664-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 20138; Mature: 20138

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCPICQDTNSRVLESRSAESGKSIRRRRECMNCQHRFTTYERIEFLTITIIKRDGKKES
CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC
FDKSKLLRGIIRSCEKTGIEVSQLEAFVNQIEVELQGKCQREITSAEIGEIVLSKLSGIS
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHH
EVAYIRFASVYRKFQGIRDFVDTLNHLQNQKENLEFTATVPQNSEISLQQDVINV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCEEEEECCCCCCCHHHHHHCCC
>Mature Secondary Structure
MLCPICQDTNSRVLESRSAESGKSIRRRRECMNCQHRFTTYERIEFLTITIIKRDGKKES
CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC
FDKSKLLRGIIRSCEKTGIEVSQLEAFVNQIEVELQGKCQREITSAEIGEIVLSKLSGIS
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHH
EVAYIRFASVYRKFQGIRDFVDTLNHLQNQKENLEFTATVPQNSEISLQQDVINV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCEEEEECCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA