| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477997
Identifier: 113477997
GI number: 113477997
Start: 7088372
End: 7089187
Strand: Reverse
Name: 113477997
Synonym: Tery_4611
Alternate gene names: NA
Gene position: 7089187-7088372 (Counterclockwise)
Preceding gene: 113477998
Following gene: 113477996
Centisome position: 91.47
GC content: 36.27
Gene sequence:
>816_bases ATGAAAATTGCAGTTATGTCTTGCATTCATGGTAACTATGAAGCTTTAAATTCTGTATTAATAGATATAGAAAAACAGAA AGCAGAGAAAATTTTCTGTCTGGGAGATTTGGTCGGTTATGGTCCCCATCCTAATGCGGTTGTCGAGCAAATTCGCAGTT TAGATATTCCCACAGTTTTAGGTTGTTGGGATGAGGATATTGTGGAGGGATTAAATTCTTGTGAATGTAGTTATCCTTCT TTATTAGCAGAGAAACGTGGCAAGTTAGCCCACGAATGGACTAATCAAGAAATTCACCCAGAAACTCGAGAATATTTAGG GTCTTTACCTCATAGTTTGAAAGAGGAAAATATGTGTTTTGTTCATGGTAGTCCTCATAGTAACCATGAATATTTATTAC CAGATTTATATGGATTTTTAGCAGTTGAAAGGGTAGTTAGTAGTGGTGCTGATGTGTTGTTTTGCGGTCATACTCATGTG CCTTATGTTCGTACTCTTGATGCTAGTCAACTATCAGTTAAAGTTAGTAGTTTTGGGAGGGAAAATTTAGAGTCAAATAC TTGTATTGCTCCTATGAAAAAAATTGTTAATGTTGGCTCTGTAGGAGAACCTCGCCATGGCAGACCGAATGCTACTTATG TTATTTATGATAATGAAACAGGGGAAGTAAATATTCGAGAGATTCCCTATGATTATCAACTTACTTGTGAAGCTATAGTT AATAAGGGGTTGCCAGAAATTTTTGCTTGGCGTTTGGCAAAGGGTTTAGAATATGCTGAAAAAGCTGATGATCCTACTCA TATTTGTGAGAGATAA
Upstream 100 bases:
>100_bases TGGCGGAAAGTTTACAAGATTGTTGTTTGCCTGATGCAACAATTTTAGCTTATCAACAACAAGTGAAAGAAACATTAGGA ATTACAGAGGAAGAATTAGT
Downstream 100 bases:
>100_bases TTAATTAGGAGTTGGTTGTTGACTTGTAATTATTACAAGTTTTGAGTTGAAAGTGCTATCTATTTTAGATTATGAAAAAA AAGATGCTAATTTAACTTGA
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKIAVMSCIHGNYEALNSVLIDIEKQKAEKIFCLGDLVGYGPHPNAVVEQIRSLDIPTVLGCWDEDIVEGLNSCECSYPS LLAEKRGKLAHEWTNQEIHPETREYLGSLPHSLKEENMCFVHGSPHSNHEYLLPDLYGFLAVERVVSSGADVLFCGHTHV PYVRTLDASQLSVKVSSFGRENLESNTCIAPMKKIVNVGSVGEPRHGRPNATYVIYDNETGEVNIREIPYDYQLTCEAIV NKGLPEIFAWRLAKGLEYAEKADDPTHICER
Sequences:
>Translated_271_residues MKIAVMSCIHGNYEALNSVLIDIEKQKAEKIFCLGDLVGYGPHPNAVVEQIRSLDIPTVLGCWDEDIVEGLNSCECSYPS LLAEKRGKLAHEWTNQEIHPETREYLGSLPHSLKEENMCFVHGSPHSNHEYLLPDLYGFLAVERVVSSGADVLFCGHTHV PYVRTLDASQLSVKVSSFGRENLESNTCIAPMKKIVNVGSVGEPRHGRPNATYVIYDNETGEVNIREIPYDYQLTCEAIV NKGLPEIFAWRLAKGLEYAEKADDPTHICER >Mature_271_residues MKIAVMSCIHGNYEALNSVLIDIEKQKAEKIFCLGDLVGYGPHPNAVVEQIRSLDIPTVLGCWDEDIVEGLNSCECSYPS LLAEKRGKLAHEWTNQEIHPETREYLGSLPHSLKEENMCFVHGSPHSNHEYLLPDLYGFLAVERVVSSGADVLFCGHTHV PYVRTLDASQLSVKVSSFGRENLESNTCIAPMKKIVNVGSVGEPRHGRPNATYVIYDNETGEVNIREIPYDYQLTCEAIV NKGLPEIFAWRLAKGLEYAEKADDPTHICER
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR011152 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 30300; Mature: 30300
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAVMSCIHGNYEALNSVLIDIEKQKAEKIFCLGDLVGYGPHPNAVVEQIRSLDIPTVL CCEEEEEHHCCCHHHHHHHHHHHHHHHHCEEEEEHHHHCCCCCCHHHHHHHHHCCCCCEE GCWDEDIVEGLNSCECSYPSLLAEKRGKLAHEWTNQEIHPETREYLGSLPHSLKEENMCF CCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCHHHCCCCEEE VHGSPHSNHEYLLPDLYGFLAVERVVSSGADVLFCGHTHVPYVRTLDASQLSVKVSSFGR EECCCCCCCCEECHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCHHHEEEHHHCCC ENLESNTCIAPMKKIVNVGSVGEPRHGRPNATYVIYDNETGEVNIREIPYDYQLTCEAIV CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEHHHHH NKGLPEIFAWRLAKGLEYAEKADDPTHICER HCCCHHHHHHHHHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure MKIAVMSCIHGNYEALNSVLIDIEKQKAEKIFCLGDLVGYGPHPNAVVEQIRSLDIPTVL CCEEEEEHHCCCHHHHHHHHHHHHHHHHCEEEEEHHHHCCCCCCHHHHHHHHHCCCCCEE GCWDEDIVEGLNSCECSYPSLLAEKRGKLAHEWTNQEIHPETREYLGSLPHSLKEENMCF CCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCHHHCCCCEEE VHGSPHSNHEYLLPDLYGFLAVERVVSSGADVLFCGHTHVPYVRTLDASQLSVKVSSFGR EECCCCCCCCEECHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCHHHEEEHHHCCC ENLESNTCIAPMKKIVNVGSVGEPRHGRPNATYVIYDNETGEVNIREIPYDYQLTCEAIV CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEHHHHH NKGLPEIFAWRLAKGLEYAEKADDPTHICER HCCCHHHHHHHHHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]