| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113477904
Identifier: 113477904
GI number: 113477904
Start: 6955395
End: 6955958
Strand: Reverse
Name: 113477904
Synonym: Tery_4506
Alternate gene names: NA
Gene position: 6955958-6955395 (Counterclockwise)
Preceding gene: 113477905
Following gene: 113477903
Centisome position: 89.75
GC content: 33.16
Gene sequence:
>564_bases GTGTTAGGTAATGTTCCATTTAATATTCCTAATACCACTAATAATATTTGGCACAGCCATCATGCTGGTGGCCCTAATCT GAGGATGTTAACAGTTGATGTGGGGCTATTCGGAGTCACAGAAGTTCATACTTTAATTAATACTTATTGGGGGAAAACAG CAGGTTTAGCTTCTATTGAATTTCATGGTTCAGATGATGCTTATTATAAAAAAACCTTATATGGCAACTCTGATATTCGA GATTATAATCAATACTATTGGACAAATAATGTTAATAACACGACAACAGTTAAAGTATTTAGTGATCCCTACGGGTTAAT TGGGACTGAAGATCGCCTTGATAAACAATTAATTAATTTACCAGTAACTTTTAACGATGAAGAGCTTTCTACAATTGTAT TTAAAGACTGGGGAAGTACTGGCTATCAAAGAATTTTTGTTTCTGGAATTACTGCTGGCATTGCCGCTGAGAATACAGAA CAAAATTCTATTCCTGAATCTTCTAATATATTAGCACTGATTTCTGTAATTGGATTAAGTCCTATTTTTCTCAAAAAAAG ATAA
Upstream 100 bases:
>100_bases GAAAGCAACCGCAGTACAATTATATTAAACAATTGATTTTTCTGATGGGTTTAATAGCAGTCTACAGAATATTAATTCTG ATTTTCCTAGTGGTAATTTA
Downstream 100 bases:
>100_bases CAGCTTTTTGGGACCTTGGCGACACATTAGACTTGGACTGACAGAAAACTCATATTTCAATCAGTAATATTCATAATATT CTGATAAAATAAAATAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLGNVPFNIPNTTNNIWHSHHAGGPNLRMLTVDVGLFGVTEVHTLINTYWGKTAGLASIEFHGSDDAYYKKTLYGNSDIR DYNQYYWTNNVNNTTTVKVFSDPYGLIGTEDRLDKQLINLPVTFNDEELSTIVFKDWGSTGYQRIFVSGITAGIAAENTE QNSIPESSNILALISVIGLSPIFLKKR
Sequences:
>Translated_187_residues MLGNVPFNIPNTTNNIWHSHHAGGPNLRMLTVDVGLFGVTEVHTLINTYWGKTAGLASIEFHGSDDAYYKKTLYGNSDIR DYNQYYWTNNVNNTTTVKVFSDPYGLIGTEDRLDKQLINLPVTFNDEELSTIVFKDWGSTGYQRIFVSGITAGIAAENTE QNSIPESSNILALISVIGLSPIFLKKR >Mature_187_residues MLGNVPFNIPNTTNNIWHSHHAGGPNLRMLTVDVGLFGVTEVHTLINTYWGKTAGLASIEFHGSDDAYYKKTLYGNSDIR DYNQYYWTNNVNNTTTVKVFSDPYGLIGTEDRLDKQLINLPVTFNDEELSTIVFKDWGSTGYQRIFVSGITAGIAAENTE QNSIPESSNILALISVIGLSPIFLKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20838; Mature: 20838
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGNVPFNIPNTTNNIWHSHHAGGPNLRMLTVDVGLFGVTEVHTLINTYWGKTAGLASIE CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEE FHGSDDAYYKKTLYGNSDIRDYNQYYWTNNVNNTTTVKVFSDPYGLIGTEDRLDKQLINL EECCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHCC PVTFNDEELSTIVFKDWGSTGYQRIFVSGITAGIAAENTEQNSIPESSNILALISVIGLS CEEECCCCEEEEEEECCCCCCEEEEEEECCEECEECCCCCCCCCCCCCCCEEEEHHHCCC PIFLKKR CEEEECC >Mature Secondary Structure MLGNVPFNIPNTTNNIWHSHHAGGPNLRMLTVDVGLFGVTEVHTLINTYWGKTAGLASIE CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEE FHGSDDAYYKKTLYGNSDIRDYNQYYWTNNVNNTTTVKVFSDPYGLIGTEDRLDKQLINL EECCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHCC PVTFNDEELSTIVFKDWGSTGYQRIFVSGITAGIAAENTEQNSIPESSNILALISVIGLS CEEECCCCEEEEEEECCCCCCEEEEEEECCEECEECCCCCCCCCCCCCCCEEEEHHHCCC PIFLKKR CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA