| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477714
Identifier: 113477714
GI number: 113477714
Start: 6640564
End: 6641658
Strand: Reverse
Name: 113477714
Synonym: Tery_4307
Alternate gene names: NA
Gene position: 6641658-6640564 (Counterclockwise)
Preceding gene: 113477715
Following gene: 113477713
Centisome position: 85.7
GC content: 32.15
Gene sequence:
>1095_bases ATGAGCCATTGGCATTTATTTCAAGGGAATGGAATTAAAGAAAAAGGAGTTGAAAAAAAACTCTTAAATATAGAGCCTCC TCCTTGGCGTAAATTTGGGGAAACAACAGATATTAAAGTAAATGAAAAAGGAATTGACAGTAGATGGTTAGAATTAAGAA AATTAGCAAAACAACAAAAAAAAGGATTAGAAAGAGGTAAAAACTTTCGACTTCCTCAACAACAAAAAGAAGCAAAAGAT GTAATTAACAGTGTTAACGCAGCAATTTATTTGAGAAGACCTTTATTAATAACTGGAAAACCAGGTTCTGGCAAAACATC CCTTGCTTATGCCATTGCTTATGAATTAGGTTTGGGAACTGTATTATCTTGGTCAATTACAGCAAGGTCTGCTTTACAAG ATGGACTATATCGTTATGATGCTATTGCCAGGTTACAAGATGCTCAATTAAAAAAAGAACAACACATTGGAGAATATATT ACATTAGGTGCCTTAGGTACAGCATTTTTACCTTCTCAATTTCCTCGGGTTTTATTAATAGATGAAGTTGATAAAAGTGA TATTAATTTACCCAATGATTTACTCAATATTTTTGAGGAAGGAGAATTTATTATTCCCGAATTAATGCGTAGAAGTAAAT CTAGAAAATCAGCAGAATCTTCACAAGAATTTTCACAAGAATCTCCACAACAATTTACAGTTTGGACACAAGATGAAGAC AAAGTAACCCTCAAAACTGGAAAAGTAAAATGTGCAGCTTTTCCTATTATTGTAATGACAAGTAATGGAGAAAGAGATTT TCCTCCCGCATTTAAACGACGTTGTTTAAGAGTGACAATGCCAGACCCAAAAGAGGAAGCTTTAAAAAGTATTGTTCAAG CTCATTTCGGAGATGAATTGTATAATCAAAATCAGGACTATATTGGGGAATTAATTAAAGAATTTTTGCCCAAACAAGAA GAAGGTGAAGCATTTGACAGAGCAACAGATCAGTTACTCAATACAATTCATATATTAACTCAGTCAAATAGTCCTCAAGA TGATAATAATATTGAGTCTCTTAAGGAAATTTTGTTTAAAAATTTAAGTCAATAA
Upstream 100 bases:
>100_bases GATTTTTATGTGATAACCCTTACCGAATTTTATCAAGATTTGAAGAAGACGATGCCTACACTTTTGGGTAAAATAAAATA AAAAAAAAGGAGCATAATTA
Downstream 100 bases:
>100_bases AATTTTGAAAATTTATAAATCTCTAAAAACTTATAAAACCTAAGTTAGGCAAAAAAAATCAAAACCAACAGAAGCATCAC ATCTATTTCATAAAACCATT
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; AAA ATPase; MoxR-Like ATPase; ATPase AAA Family Protein; AAA Family ATPase; ATPase-Like Protein; AAA_5 ATPase; ATPase Associated With Various Cellular Activities; AAA ATPase Central RegionATPase; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; ClpA/ClpB Family Protein; ATPase Aaa Family; AAA ATPase Family Protein; ATPase Protein
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSHWHLFQGNGIKEKGVEKKLLNIEPPPWRKFGETTDIKVNEKGIDSRWLELRKLAKQQKKGLERGKNFRLPQQQKEAKD VINSVNAAIYLRRPLLITGKPGSGKTSLAYAIAYELGLGTVLSWSITARSALQDGLYRYDAIARLQDAQLKKEQHIGEYI TLGALGTAFLPSQFPRVLLIDEVDKSDINLPNDLLNIFEEGEFIIPELMRRSKSRKSAESSQEFSQESPQQFTVWTQDED KVTLKTGKVKCAAFPIIVMTSNGERDFPPAFKRRCLRVTMPDPKEEALKSIVQAHFGDELYNQNQDYIGELIKEFLPKQE EGEAFDRATDQLLNTIHILTQSNSPQDDNNIESLKEILFKNLSQ
Sequences:
>Translated_364_residues MSHWHLFQGNGIKEKGVEKKLLNIEPPPWRKFGETTDIKVNEKGIDSRWLELRKLAKQQKKGLERGKNFRLPQQQKEAKD VINSVNAAIYLRRPLLITGKPGSGKTSLAYAIAYELGLGTVLSWSITARSALQDGLYRYDAIARLQDAQLKKEQHIGEYI TLGALGTAFLPSQFPRVLLIDEVDKSDINLPNDLLNIFEEGEFIIPELMRRSKSRKSAESSQEFSQESPQQFTVWTQDED KVTLKTGKVKCAAFPIIVMTSNGERDFPPAFKRRCLRVTMPDPKEEALKSIVQAHFGDELYNQNQDYIGELIKEFLPKQE EGEAFDRATDQLLNTIHILTQSNSPQDDNNIESLKEILFKNLSQ >Mature_363_residues SHWHLFQGNGIKEKGVEKKLLNIEPPPWRKFGETTDIKVNEKGIDSRWLELRKLAKQQKKGLERGKNFRLPQQQKEAKDV INSVNAAIYLRRPLLITGKPGSGKTSLAYAIAYELGLGTVLSWSITARSALQDGLYRYDAIARLQDAQLKKEQHIGEYIT LGALGTAFLPSQFPRVLLIDEVDKSDINLPNDLLNIFEEGEFIIPELMRRSKSRKSAESSQEFSQESPQQFTVWTQDEDK VTLKTGKVKCAAFPIIVMTSNGERDFPPAFKRRCLRVTMPDPKEEALKSIVQAHFGDELYNQNQDYIGELIKEFLPKQEE GEAFDRATDQLLNTIHILTQSNSPQDDNNIESLKEILFKNLSQ
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41461; Mature: 41330
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHWHLFQGNGIKEKGVEKKLLNIEPPPWRKFGETTDIKVNEKGIDSRWLELRKLAKQQK CCCEEEECCCCCCHHCCHHHHCCCCCCCCHHCCCCCCEEECCCCCCHHHHHHHHHHHHHH KGLERGKNFRLPQQQKEAKDVINSVNAAIYLRRPLLITGKPGSGKTSLAYAIAYELGLGT HHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEECCEEEECCCCCCCHHHHHHHHHHHCCCH VLSWSITARSALQDGLYRYDAIARLQDAQLKKEQHIGEYITLGALGTAFLPSQFPRVLLI HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCEEEE DEVDKSDINLPNDLLNIFEEGEFIIPELMRRSKSRKSAESSQEFSQESPQQFTVWTQDED ECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC KVTLKTGKVKCAAFPIIVMTSNGERDFPPAFKRRCLRVTMPDPKEEALKSIVQAHFGDEL EEEEEECCEEEEEEEEEEEECCCCCCCCHHHHHCEEECCCCCCHHHHHHHHHHHHHCHHH YNQNQDYIGELIKEFLPKQEEGEAFDRATDQLLNTIHILTQSNSPQDDNNIESLKEILFK HCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHH NLSQ HCCC >Mature Secondary Structure SHWHLFQGNGIKEKGVEKKLLNIEPPPWRKFGETTDIKVNEKGIDSRWLELRKLAKQQK CCEEEECCCCCCHHCCHHHHCCCCCCCCHHCCCCCCEEECCCCCCHHHHHHHHHHHHHH KGLERGKNFRLPQQQKEAKDVINSVNAAIYLRRPLLITGKPGSGKTSLAYAIAYELGLGT HHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEECCEEEECCCCCCCHHHHHHHHHHHCCCH VLSWSITARSALQDGLYRYDAIARLQDAQLKKEQHIGEYITLGALGTAFLPSQFPRVLLI HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCEEEE DEVDKSDINLPNDLLNIFEEGEFIIPELMRRSKSRKSAESSQEFSQESPQQFTVWTQDED ECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC KVTLKTGKVKCAAFPIIVMTSNGERDFPPAFKRRCLRVTMPDPKEEALKSIVQAHFGDEL EEEEEECCEEEEEEEEEEEECCCCCCCCHHHHHCEEECCCCCCHHHHHHHHHHHHHCHHH YNQNQDYIGELIKEFLPKQEEGEAFDRATDQLLNTIHILTQSNSPQDDNNIESLKEILFK HCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHH NLSQ HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA