Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477697

Identifier: 113477697

GI number: 113477697

Start: 6613590

End: 6613907

Strand: Reverse

Name: 113477697

Synonym: Tery_4289

Alternate gene names: NA

Gene position: 6613907-6613590 (Counterclockwise)

Preceding gene: 113477702

Following gene: 113477695

Centisome position: 85.34

GC content: 35.53

Gene sequence:

>318_bases
ATGTTGTCAGACAATATTGACTATTTTAAATCCAAACCAGTCAACATTCCTAAAATTACAATCTTACTTGATCATGGATA
TCATCCCGAAAAGATAATAGAAGAGTTAAAGAAAATTTATCCAGGGTTACGGACCAAAATTCCCTTGAAACTATCACCAA
AACCATCAAAAGCAGAGAAAAAACAGGAAGGGAAAACAGGATTTGTCCCAGTCAAAGCAAGGTGGGTAATTGAGAGAGCT
AACTCTTGGATGGAGAGATGTAAAAGCTTGAGCAAAAAAATTGATGGGAACTCTGAAAAATGCTACTGCCAAGATTAA

Upstream 100 bases:

>100_bases
TAACGGTATCAAAAGACACCTAGCAGTAGATAGTCTTGGTTTTCCTTTTTTCACCCATTGTACTAAGGCATCAGTATCTG
ATGATGCAGGATTAATAGAA

Downstream 100 bases:

>100_bases
TCTTTGTTCTATTCGACTAATGCTCAAGAGATTAGCGTTGGCAGAGGATGGTGGCGGTAGCTATATCGCCTAATTTTTTA
AAGATACACTCAGGGTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLSDNIDYFKSKPVNIPKITILLDHGYHPEKIIEELKKIYPGLRTKIPLKLSPKPSKAEKKQEGKTGFVPVKARWVIERA
NSWMERCKSLSKKIDGNSEKCYCQD

Sequences:

>Translated_105_residues
MLSDNIDYFKSKPVNIPKITILLDHGYHPEKIIEELKKIYPGLRTKIPLKLSPKPSKAEKKQEGKTGFVPVKARWVIERA
NSWMERCKSLSKKIDGNSEKCYCQD
>Mature_105_residues
MLSDNIDYFKSKPVNIPKITILLDHGYHPEKIIEELKKIYPGLRTKIPLKLSPKPSKAEKKQEGKTGFVPVKARWVIERA
NSWMERCKSLSKKIDGNSEKCYCQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12145; Mature: 12145

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDNIDYFKSKPVNIPKITILLDHGYHPEKIIEELKKIYPGLRTKIPLKLSPKPSKAEK
CCCCCCCHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHH
KQEGKTGFVPVKARWVIERANSWMERCKSLSKKIDGNSEKCYCQD
HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure
MLSDNIDYFKSKPVNIPKITILLDHGYHPEKIIEELKKIYPGLRTKIPLKLSPKPSKAEK
CCCCCCCHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHH
KQEGKTGFVPVKARWVIERANSWMERCKSLSKKIDGNSEKCYCQD
HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA