| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477697
Identifier: 113477697
GI number: 113477697
Start: 6613590
End: 6613907
Strand: Reverse
Name: 113477697
Synonym: Tery_4289
Alternate gene names: NA
Gene position: 6613907-6613590 (Counterclockwise)
Preceding gene: 113477702
Following gene: 113477695
Centisome position: 85.34
GC content: 35.53
Gene sequence:
>318_bases ATGTTGTCAGACAATATTGACTATTTTAAATCCAAACCAGTCAACATTCCTAAAATTACAATCTTACTTGATCATGGATA TCATCCCGAAAAGATAATAGAAGAGTTAAAGAAAATTTATCCAGGGTTACGGACCAAAATTCCCTTGAAACTATCACCAA AACCATCAAAAGCAGAGAAAAAACAGGAAGGGAAAACAGGATTTGTCCCAGTCAAAGCAAGGTGGGTAATTGAGAGAGCT AACTCTTGGATGGAGAGATGTAAAAGCTTGAGCAAAAAAATTGATGGGAACTCTGAAAAATGCTACTGCCAAGATTAA
Upstream 100 bases:
>100_bases TAACGGTATCAAAAGACACCTAGCAGTAGATAGTCTTGGTTTTCCTTTTTTCACCCATTGTACTAAGGCATCAGTATCTG ATGATGCAGGATTAATAGAA
Downstream 100 bases:
>100_bases TCTTTGTTCTATTCGACTAATGCTCAAGAGATTAGCGTTGGCAGAGGATGGTGGCGGTAGCTATATCGCCTAATTTTTTA AAGATACACTCAGGGTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MLSDNIDYFKSKPVNIPKITILLDHGYHPEKIIEELKKIYPGLRTKIPLKLSPKPSKAEKKQEGKTGFVPVKARWVIERA NSWMERCKSLSKKIDGNSEKCYCQD
Sequences:
>Translated_105_residues MLSDNIDYFKSKPVNIPKITILLDHGYHPEKIIEELKKIYPGLRTKIPLKLSPKPSKAEKKQEGKTGFVPVKARWVIERA NSWMERCKSLSKKIDGNSEKCYCQD >Mature_105_residues MLSDNIDYFKSKPVNIPKITILLDHGYHPEKIIEELKKIYPGLRTKIPLKLSPKPSKAEKKQEGKTGFVPVKARWVIERA NSWMERCKSLSKKIDGNSEKCYCQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12145; Mature: 12145
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDNIDYFKSKPVNIPKITILLDHGYHPEKIIEELKKIYPGLRTKIPLKLSPKPSKAEK CCCCCCCHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHH KQEGKTGFVPVKARWVIERANSWMERCKSLSKKIDGNSEKCYCQD HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MLSDNIDYFKSKPVNIPKITILLDHGYHPEKIIEELKKIYPGLRTKIPLKLSPKPSKAEK CCCCCCCHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHH KQEGKTGFVPVKARWVIERANSWMERCKSLSKKIDGNSEKCYCQD HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA