| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476954
Identifier: 113476954
GI number: 113476954
Start: 5274681
End: 5275751
Strand: Reverse
Name: 113476954
Synonym: Tery_3450
Alternate gene names: NA
Gene position: 5275751-5274681 (Counterclockwise)
Preceding gene: 113476955
Following gene: 113476953
Centisome position: 68.07
GC content: 38.38
Gene sequence:
>1071_bases ATGAACCAGGAACAGACATTTCCCATAAGTGACCAACTAACTTATGTAACTTCTCCAGCTATTCTCAAAAAAGCTATTTT ATACAAGCTTGATAGCTATATTTCAGGTTGTGGTGAGTTGGTGCTTCCATGTCTGCCTGGTATGCTGGACTATTACATGA ATGTTGTAGAAAAATTATTTTCTCATCTGGGTAGACCAATGCCCAGAGAAAGACAGCAACAGTTCAGTCAAATGCTCCAA AAGAAGCTAGCAGAAGGATATAATATTTCTGCAACTGCAATGTTGGTTATTCAATATGAATTGCTAAAATCTCCAGAAAA AGGTATGGCTTGTCAAGTAATTCTTCGCACTCCAACCCTGGGAGAACATTATAAATCTTGGGTAGATCATAGAAAACCTC CTTTATTTGGTTCCTACCCTGATGCTAAGGTCTTAGCAACTGTCGCAGAATTTGGGGAAAACTCTACTAAAATCTTAGAC GTCGGGGGAGCTACAGGTAGAAATGCTTTACCCTTGGCCCGTATGGGTCATTATGTAGATGTTTTAGAGTTAACCCCTGT TTTTGTTGAACAGTTACAAACAGCAATAGCTACAGAAAATTTATCAATTAATGTGATCAAGGGAGATATTCTTGATCCAC TGATCAGGTTACGACCAGCCTTTTATCAGTTAGCGATCGCTACAGAGGTAGTATCTCATTTTCGCGATGTAGAAGACTTG CGGTTATTTCTAGCAAAAATGTCTGATTTTATTTGTTCTGGTGGTTTGCTTTTGTTCAATATATTTTTGACAGTAAATGA ATATGTTCCAGATAAATTAGTACAAGACACAGCGCAGTTATGTTGGTCGACTTTGTTTACATCTGAAGAATTAACAAAAG CGATGGAAGGTTTACCCTTAGTCAGTGTTTCTAATGAATTAGTTATTGAATATGAACGTCAGCATTTACCAAAAACAGAA TGGCCTCCCACAAGTTGGTTTGAAAGTTGGGCGACTGGTAGAGATGTTTTTCCTTTGGCGAATGGTAAACCCCCTTTAGA GTTACGGTGGATACTATGTCGGCGTTTGTAG
Upstream 100 bases:
>100_bases AACTAGATAATTATAGATATTATAGATTTTTGTATATTTCTGCAAAGAGCAAGTTGACTATCTTAACAATTAATTTGATA TATCAAAGTAAAATCTGTTG
Downstream 100 bases:
>100_bases TCAACTATGAAGTGGATGCTTTCCACTTATGAGTATATTCTTTTTTTCAGTCTATGGTTAATAAACCTAATACTAATTCC TAAAATTCATGCTACCTTGA
Product: type 12 methyltransferase
Products: NA
Alternate protein names: O-Methyltransferase
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MNQEQTFPISDQLTYVTSPAILKKAILYKLDSYISGCGELVLPCLPGMLDYYMNVVEKLFSHLGRPMPRERQQQFSQMLQ KKLAEGYNISATAMLVIQYELLKSPEKGMACQVILRTPTLGEHYKSWVDHRKPPLFGSYPDAKVLATVAEFGENSTKILD VGGATGRNALPLARMGHYVDVLELTPVFVEQLQTAIATENLSINVIKGDILDPLIRLRPAFYQLAIATEVVSHFRDVEDL RLFLAKMSDFICSGGLLLFNIFLTVNEYVPDKLVQDTAQLCWSTLFTSEELTKAMEGLPLVSVSNELVIEYERQHLPKTE WPPTSWFESWATGRDVFPLANGKPPLELRWILCRRL
Sequences:
>Translated_356_residues MNQEQTFPISDQLTYVTSPAILKKAILYKLDSYISGCGELVLPCLPGMLDYYMNVVEKLFSHLGRPMPRERQQQFSQMLQ KKLAEGYNISATAMLVIQYELLKSPEKGMACQVILRTPTLGEHYKSWVDHRKPPLFGSYPDAKVLATVAEFGENSTKILD VGGATGRNALPLARMGHYVDVLELTPVFVEQLQTAIATENLSINVIKGDILDPLIRLRPAFYQLAIATEVVSHFRDVEDL RLFLAKMSDFICSGGLLLFNIFLTVNEYVPDKLVQDTAQLCWSTLFTSEELTKAMEGLPLVSVSNELVIEYERQHLPKTE WPPTSWFESWATGRDVFPLANGKPPLELRWILCRRL >Mature_356_residues MNQEQTFPISDQLTYVTSPAILKKAILYKLDSYISGCGELVLPCLPGMLDYYMNVVEKLFSHLGRPMPRERQQQFSQMLQ KKLAEGYNISATAMLVIQYELLKSPEKGMACQVILRTPTLGEHYKSWVDHRKPPLFGSYPDAKVLATVAEFGENSTKILD VGGATGRNALPLARMGHYVDVLELTPVFVEQLQTAIATENLSINVIKGDILDPLIRLRPAFYQLAIATEVVSHFRDVEDL RLFLAKMSDFICSGGLLLFNIFLTVNEYVPDKLVQDTAQLCWSTLFTSEELTKAMEGLPLVSVSNELVIEYERQHLPKTE WPPTSWFESWATGRDVFPLANGKPPLELRWILCRRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40290; Mature: 40290
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQEQTFPISDQLTYVTSPAILKKAILYKLDSYISGCGELVLPCLPGMLDYYMNVVEKLF CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHLGRPMPRERQQQFSQMLQKKLAEGYNISATAMLVIQYELLKSPEKGMACQVILRTPTL HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCC GEHYKSWVDHRKPPLFGSYPDAKVLATVAEFGENSTKILDVGGATGRNALPLARMGHYVD HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHCCHHH VLELTPVFVEQLQTAIATENLSINVIKGDILDPLIRLRPAFYQLAIATEVVSHFRDVEDL HHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH RLFLAKMSDFICSGGLLLFNIFLTVNEYVPDKLVQDTAQLCWSTLFTSEELTKAMEGLPL HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCE VSVSNELVIEYERQHLPKTEWPPTSWFESWATGRDVFPLANGKPPLELRWILCRRL EECCCHHEEEEHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MNQEQTFPISDQLTYVTSPAILKKAILYKLDSYISGCGELVLPCLPGMLDYYMNVVEKLF CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHLGRPMPRERQQQFSQMLQKKLAEGYNISATAMLVIQYELLKSPEKGMACQVILRTPTL HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCC GEHYKSWVDHRKPPLFGSYPDAKVLATVAEFGENSTKILDVGGATGRNALPLARMGHYVD HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHCCHHH VLELTPVFVEQLQTAIATENLSINVIKGDILDPLIRLRPAFYQLAIATEVVSHFRDVEDL HHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH RLFLAKMSDFICSGGLLLFNIFLTVNEYVPDKLVQDTAQLCWSTLFTSEELTKAMEGLPL HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCE VSVSNELVIEYERQHLPKTEWPPTSWFESWATGRDVFPLANGKPPLELRWILCRRL EECCCHHEEEEHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA