| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476880
Identifier: 113476880
GI number: 113476880
Start: 5161799
End: 5162062
Strand: Reverse
Name: 113476880
Synonym: Tery_3366
Alternate gene names: NA
Gene position: 5162062-5161799 (Counterclockwise)
Preceding gene: 113476881
Following gene: 113476879
Centisome position: 66.61
GC content: 33.71
Gene sequence:
>264_bases ATGGATCAACAAAGACAAGAGCAATATTTTGAATTAATTGATAAATTAGCGAAGTGCCCAAATGGGAAAGAACCTGATAT TTTAGATGAAAATATTGAATTAGTTGATGCAGATTTTATTTCCGTTTTAATGGAAGTAGGTCAAGCCCAAATTCATCATG GAAATCAAGATGGAGCTAAATTTTTATTCCATCTTGCTCGTGAATTAGCAAAACAATTAGGGTTTTATCCTGACCCAAAT GCTTCTCAAGCTCCTGCTCAGTAA
Upstream 100 bases:
>100_bases GTCAACAGTTTTGAGAGTAAAAGGTAGGAGAAACTACGCCAAAATATACAAAGTATTTGATAATCTCAAAAAAAAATTAA TACTAAGGACGGAAATTATC
Downstream 100 bases:
>100_bases ATAGATAGTTAATGTTATGTTTTCTCAAAAAGAAGCAGAAAATTTAGCAATTGATTTTTTGATTAATGATTGGGAAATTC CCCAGACTGAAAAAGATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MDQQRQEQYFELIDKLAKCPNGKEPDILDENIELVDADFISVLMEVGQAQIHHGNQDGAKFLFHLARELAKQLGFYPDPN ASQAPAQ
Sequences:
>Translated_87_residues MDQQRQEQYFELIDKLAKCPNGKEPDILDENIELVDADFISVLMEVGQAQIHHGNQDGAKFLFHLARELAKQLGFYPDPN ASQAPAQ >Mature_87_residues MDQQRQEQYFELIDKLAKCPNGKEPDILDENIELVDADFISVLMEVGQAQIHHGNQDGAKFLFHLARELAKQLGFYPDPN ASQAPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9839; Mature: 9839
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQQRQEQYFELIDKLAKCPNGKEPDILDENIELVDADFISVLMEVGQAQIHHGNQDGAK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH FLFHLARELAKQLGFYPDPNASQAPAQ HHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDQQRQEQYFELIDKLAKCPNGKEPDILDENIELVDADFISVLMEVGQAQIHHGNQDGAK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH FLFHLARELAKQLGFYPDPNASQAPAQ HHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA