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The map label for this gene is yebA [C]

Identifier: 113476865

GI number: 113476865

Start: 5140081

End: 5142144

Strand: Reverse

Name: yebA [C]

Synonym: Tery_3351

Alternate gene names: 113476865

Gene position: 5142144-5140081 (Counterclockwise)

Preceding gene: 113476866

Following gene: 113476860

Centisome position: 66.35

GC content: 40.46

Gene sequence:

>2064_bases
ATGTCACCAGAAAATCAAAATCAATCAATTGAGTCTAAAGCTGAAATACAGGAAATAACTCAAGGGCCGAACCAAAAGCA
AAATTTGAAAATCACCAAACTCTTCCCTCGCAAATCACTTATGCAGCTAGGTTGTTGTCTAGCTAGTTTAGGGATGCTGA
GTAGAGGTATGGTTTTAGGGGAGGTGGTTTTGGAAATAGAAGTATATGACTATGACCCATCATATCAACCCGCCCCAGTA
CCCCAAACATCTTATTCAGCACCATCTTATTCACCAGAGCCATATTATTCGCCAGCACCATCTTATTCACCAGAGCCATA
TTATTCGCCAGCACCATCTTATTCACCAGAGCCATATTATTCACCAGCACCATCCTATTCACCAGCACCATATTATTCTC
AACCCTACTACGAACCAGCACCATATTATTCACCAGCACCATCTTATTCACCAGAACCATATTATTCTTCACCAGCACCA
AGTTATTACGAACCAGAACCATATTATTCTCAACCCTACTACGAACCAGAGCCATATTATTCACCGGAACCATATTATTC
TCAACCAGCACCAACTTATGAACCGGAACCTTATTACTATTCCCAGCCAGCACCAATTTATGAACCGGAACCAGAACCGG
AACCAGACAGTACTATCTATCTACCCAAAAATTTATATGTAGCACCTCCGACTAATACTAATATCAACCTATCAAAAAAA
TCTAAAAATAACTTACCACCTCTAACACTACCAAAACCTGAGAAGCTTTATTATTATAATGGTTCGACTAATGCTTATAT
AGATGAGACAGATTATAAAGTGGGTGCAACTGATAGTTATGAGGCACCAAGTACAGTAGTTTTCTCAGAGCGTTCTACAG
GTGAAGTTGCTCAATATCCAACAAATAATAAAAATTGGAGTGCTGTAGCCGAAAATAATAATAAAAATTGGAGTGCTGTA
GCTGAAAATAATAATAATTGGAGCGCCCCTACTCAGAACAATAATTGGAGTGGAACTACTGCAACAAATAATTGGAGTGC
TCCTGCTCAAACTTCATCTTATAATTCATTGTATGGGGAAGGTCGGCAAAATTACTCCTCCAACGATAATAGTTATTATT
CTTCCAATGATAATAGCTATTACTCTTCCAAGGATAATAGTTATTATTCAGATACTTCTAGTTATAGTCAAACAAGTTAC
TATTCAAACTCATCCTCCGGTCAAAATGGTTATTACTCCAGCACCTCTTATGCTCCAAACTACTCAGACTCTTCAAGAGG
AGTGGAGGTGGCAGCAGTATTACCGGCTCAGGTGCAGGGACTTTTTCATAACCCCATATCTCAGTCAGGTTTAGCTTATT
ACAAACGCACCATGCGACCTCCGGCAGTACCTGGAAATGGTAATACTCGGTTAATATTTCCTCTATCTGTTCCAGCACCT
ATTACTTCATTATTTGGGTGGAGAGAACATCCAGTTTTAGGTTATAGAAAGTTTCATACTGGAACAGACTTAGGGGCACC
AACTGGTACTCCAGTAGTGGCAACTTATGCAGGAAAGGTAGCGATCGCTGACTGGTTAGGTGGTTATGGTGTAGCTGTTG
TGTTAGACCACCAGAGAAAATCATTGGAAACTCTCTATGGTCACTTATCAGAAATTTTTGTGCAGCCAGGGGAGTTTGTA
CAACAGGGTGAGGTTATTGGCAGGGTTGGTAGTACGGGAATGTCTACGGGTCCCCATTTACATTTTGAAATGCGACAGTT
AACACAGGATGGATGGGTGACGAAAGATCCAGATAGTCATATTGAGTTTGCTTTGGGGAATTTGATGGCAGCATTGAAGG
TTACGGAAGTACCGCCTGTACCAGAGGTTAGTATTAATGAGTTGCTGAAGCAGACTAAAGATAATGGTTCTGGTCTGCCA
CAACTGCCTCCTTTACCCCCAGGGTTTGAAGTACCTATTCCTGATTTAGAACCGCCAATTTTTGAGTTGACAAAAGCTTC
GGAAGAGTCTGATGAGGATGTCAAAGTTAGTTTGAATGAGCAGGAAAAAAAAGTGGTGGAATAA

Upstream 100 bases:

>100_bases
TTACTTGCTTTCCAAACCCATAGGGTGAAAAAACATGGTTATATCGAAGTCAAAGTTTATTAAACTGTTAAATTGTTTAT
AAAAAGCAACTTAAATAATA

Downstream 100 bases:

>100_bases
GGTTAGTTGAGTAGGGAAAATTTTACTAAACTCCTGGATATTTGAGAAAAATATTACAGGAGTTTTTGTCAGGATAAGTT
TAATAAGTTATATTATGTCT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 686

Protein sequence:

>687_residues
MSPENQNQSIESKAEIQEITQGPNQKQNLKITKLFPRKSLMQLGCCLASLGMLSRGMVLGEVVLEIEVYDYDPSYQPAPV
PQTSYSAPSYSPEPYYSPAPSYSPEPYYSPAPSYSPEPYYSPAPSYSPAPYYSQPYYEPAPYYSPAPSYSPEPYYSSPAP
SYYEPEPYYSQPYYEPEPYYSPEPYYSQPAPTYEPEPYYYSQPAPIYEPEPEPEPDSTIYLPKNLYVAPPTNTNINLSKK
SKNNLPPLTLPKPEKLYYYNGSTNAYIDETDYKVGATDSYEAPSTVVFSERSTGEVAQYPTNNKNWSAVAENNNKNWSAV
AENNNNWSAPTQNNNWSGTTATNNWSAPAQTSSYNSLYGEGRQNYSSNDNSYYSSNDNSYYSSKDNSYYSDTSSYSQTSY
YSNSSSGQNGYYSSTSYAPNYSDSSRGVEVAAVLPAQVQGLFHNPISQSGLAYYKRTMRPPAVPGNGNTRLIFPLSVPAP
ITSLFGWREHPVLGYRKFHTGTDLGAPTGTPVVATYAGKVAIADWLGGYGVAVVLDHQRKSLETLYGHLSEIFVQPGEFV
QQGEVIGRVGSTGMSTGPHLHFEMRQLTQDGWVTKDPDSHIEFALGNLMAALKVTEVPPVPEVSINELLKQTKDNGSGLP
QLPPLPPGFEVPIPDLEPPIFELTKASEESDEDVKVSLNEQEKKVVE

Sequences:

>Translated_687_residues
MSPENQNQSIESKAEIQEITQGPNQKQNLKITKLFPRKSLMQLGCCLASLGMLSRGMVLGEVVLEIEVYDYDPSYQPAPV
PQTSYSAPSYSPEPYYSPAPSYSPEPYYSPAPSYSPEPYYSPAPSYSPAPYYSQPYYEPAPYYSPAPSYSPEPYYSSPAP
SYYEPEPYYSQPYYEPEPYYSPEPYYSQPAPTYEPEPYYYSQPAPIYEPEPEPEPDSTIYLPKNLYVAPPTNTNINLSKK
SKNNLPPLTLPKPEKLYYYNGSTNAYIDETDYKVGATDSYEAPSTVVFSERSTGEVAQYPTNNKNWSAVAENNNKNWSAV
AENNNNWSAPTQNNNWSGTTATNNWSAPAQTSSYNSLYGEGRQNYSSNDNSYYSSNDNSYYSSKDNSYYSDTSSYSQTSY
YSNSSSGQNGYYSSTSYAPNYSDSSRGVEVAAVLPAQVQGLFHNPISQSGLAYYKRTMRPPAVPGNGNTRLIFPLSVPAP
ITSLFGWREHPVLGYRKFHTGTDLGAPTGTPVVATYAGKVAIADWLGGYGVAVVLDHQRKSLETLYGHLSEIFVQPGEFV
QQGEVIGRVGSTGMSTGPHLHFEMRQLTQDGWVTKDPDSHIEFALGNLMAALKVTEVPPVPEVSINELLKQTKDNGSGLP
QLPPLPPGFEVPIPDLEPPIFELTKASEESDEDVKVSLNEQEKKVVE
>Mature_686_residues
SPENQNQSIESKAEIQEITQGPNQKQNLKITKLFPRKSLMQLGCCLASLGMLSRGMVLGEVVLEIEVYDYDPSYQPAPVP
QTSYSAPSYSPEPYYSPAPSYSPEPYYSPAPSYSPEPYYSPAPSYSPAPYYSQPYYEPAPYYSPAPSYSPEPYYSSPAPS
YYEPEPYYSQPYYEPEPYYSPEPYYSQPAPTYEPEPYYYSQPAPIYEPEPEPEPDSTIYLPKNLYVAPPTNTNINLSKKS
KNNLPPLTLPKPEKLYYYNGSTNAYIDETDYKVGATDSYEAPSTVVFSERSTGEVAQYPTNNKNWSAVAENNNKNWSAVA
ENNNNWSAPTQNNNWSGTTATNNWSAPAQTSSYNSLYGEGRQNYSSNDNSYYSSNDNSYYSSKDNSYYSDTSSYSQTSYY
SNSSSGQNGYYSSTSYAPNYSDSSRGVEVAAVLPAQVQGLFHNPISQSGLAYYKRTMRPPAVPGNGNTRLIFPLSVPAPI
TSLFGWREHPVLGYRKFHTGTDLGAPTGTPVVATYAGKVAIADWLGGYGVAVVLDHQRKSLETLYGHLSEIFVQPGEFVQ
QGEVIGRVGSTGMSTGPHLHFEMRQLTQDGWVTKDPDSHIEFALGNLMAALKVTEVPPVPEVSINELLKQTKDNGSGLPQ
LPPLPPGFEVPIPDLEPPIFELTKASEESDEDVKVSLNEQEKKVVE

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=115, Percent_Identity=42.6086956521739, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87082297, Length=89, Percent_Identity=41.5730337078652, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 76245; Mature: 76114

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPENQNQSIESKAEIQEITQGPNQKQNLKITKLFPRKSLMQLGCCLASLGMLSRGMVLG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEE
EVVLEIEVYDYDPSYQPAPVPQTSYSAPSYSPEPYYSPAPSYSPEPYYSPAPSYSPEPYY
EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPAPSYSPAPYYSQPYYEPAPYYSPAPSYSPEPYYSSPAPSYYEPEPYYSQPYYEPEPYY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPEPYYSQPAPTYEPEPYYYSQPAPIYEPEPEPEPDSTIYLPKNLYVAPPTNTNINLSKK
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCEEEECC
SKNNLPPLTLPKPEKLYYYNGSTNAYIDETDYKVGATDSYEAPSTVVFSERSTGEVAQYP
CCCCCCCCCCCCCCEEEEECCCCCEEEECCCCEECCCCCCCCCCEEEEECCCCCCCEECC
TNNKNWSAVAENNNKNWSAVAENNNNWSAPTQNNNWSGTTATNNWSAPAQTSSYNSLYGE
CCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
GRQNYSSNDNSYYSSNDNSYYSSKDNSYYSDTSSYSQTSYYSNSSSGQNGYYSSTSYAPN
CCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
YSDSSRGVEVAAVLPAQVQGLFHNPISQSGLAYYKRTMRPPAVPGNGNTRLIFPLSVPAP
CCCCCCCEEEEEECCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCH
ITSLFGWREHPVLGYRKFHTGTDLGAPTGTPVVATYAGKVAIADWLGGYGVAVVLDHQRK
HHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEHHCCCCEEEEEECCCHH
SLETLYGHLSEIFVQPGEFVQQGEVIGRVGSTGMSTGPHLHFEMRQLTQDGWVTKDPDSH
HHHHHHHHHHHHHCCCHHHHHHCHHHHHCCCCCCCCCCEEEHHHHHHHHCCCEECCCCHH
IEFALGNLMAALKVTEVPPVPEVSINELLKQTKDNGSGLPQLPPLPPGFEVPIPDLEPPI
HHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
FELTKASEESDEDVKVSLNEQEKKVVE
HHHHHCCCCCCCCEEEEECCHHHHHCC
>Mature Secondary Structure 
SPENQNQSIESKAEIQEITQGPNQKQNLKITKLFPRKSLMQLGCCLASLGMLSRGMVLG
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEE
EVVLEIEVYDYDPSYQPAPVPQTSYSAPSYSPEPYYSPAPSYSPEPYYSPAPSYSPEPYY
EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPAPSYSPAPYYSQPYYEPAPYYSPAPSYSPEPYYSSPAPSYYEPEPYYSQPYYEPEPYY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPEPYYSQPAPTYEPEPYYYSQPAPIYEPEPEPEPDSTIYLPKNLYVAPPTNTNINLSKK
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCEEEECC
SKNNLPPLTLPKPEKLYYYNGSTNAYIDETDYKVGATDSYEAPSTVVFSERSTGEVAQYP
CCCCCCCCCCCCCCEEEEECCCCCEEEECCCCEECCCCCCCCCCEEEEECCCCCCCEECC
TNNKNWSAVAENNNKNWSAVAENNNNWSAPTQNNNWSGTTATNNWSAPAQTSSYNSLYGE
CCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
GRQNYSSNDNSYYSSNDNSYYSSKDNSYYSDTSSYSQTSYYSNSSSGQNGYYSSTSYAPN
CCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
YSDSSRGVEVAAVLPAQVQGLFHNPISQSGLAYYKRTMRPPAVPGNGNTRLIFPLSVPAP
CCCCCCCEEEEEECCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCH
ITSLFGWREHPVLGYRKFHTGTDLGAPTGTPVVATYAGKVAIADWLGGYGVAVVLDHQRK
HHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEHHCCCCEEEEEECCCHH
SLETLYGHLSEIFVQPGEFVQQGEVIGRVGSTGMSTGPHLHFEMRQLTQDGWVTKDPDSH
HHHHHHHHHHHHHCCCHHHHHHCHHHHHCCCCCCCCCCEEEHHHHHHHHCCCEECCCCHH
IEFALGNLMAALKVTEVPPVPEVSINELLKQTKDNGSGLPQLPPLPPGFEVPIPDLEPPI
HHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
FELTKASEESDEDVKVSLNEQEKKVVE
HHHHHCCCCCCCCEEEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]