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The map label for this gene is ydjH [C]

Identifier: 113476808

GI number: 113476808

Start: 5041433

End: 5042443

Strand: Reverse

Name: ydjH [C]

Synonym: Tery_3284

Alternate gene names: 113476808

Gene position: 5042443-5041433 (Counterclockwise)

Preceding gene: 113476809

Following gene: 113476805

Centisome position: 65.06

GC content: 38.97

Gene sequence:

>1011_bases
ATGACAGCAGTAAACACCCAAAAATTAGATGTATATGGTGTCGGTAACGCCCTAGTTGACATCCTCGCACTTGTAGAAGA
AGACTTTATCACCAAATTTTCCCTCCAAAAAAGTGGCATGACTCTTATGGATGCTCAAAAACAAGGAGGAATTTTGGCAG
GACTAAAAGATATATCTTTAAAAAAGCGTTCCGGAGGTTCAGCAGCAAATTCCATGATAGCCCTCGCTCAGAGTGGAGGA
ACAGGTATTTTTGTGGCAAAAGTTGCCAGTGATCCTAACGGAGAACTATACCGCCAAGATATGCTCAACTTTAAAATGGA
TTTTAATGTACCTCCTGCACCTACAGCAGATAACCCCACTGGTACTTGTGTTGTACTGACAACCCCCGATGCTGAACGTA
CCATGTGTACAAATTTGGGAGTATCTGTAAATCTTAGTGTTAGTGATATTGATGTAGAACAAATTAAGCGTTGCAAATAT
AGTTATGTAGAAGGTTATTTGTGGACTGGAGACAGTACAAAAGAAGCTTGTAAGCAAGCTATGCAATATTCTAAGGATGA
AAAAGTAAAAGTTTGTTTTACCTTCTCAGATCAGTTCCTAGTAGATATGTTCGCTGATGAGTTCCGTTCATTACTTTTAG
ATTATTGTGATGTATTATTCTGTAATGCTGATGAAGCCCGTAGTTTTTGCAAAAAAGACTCTTTAGATGACTCTGCAAAA
AGTATAGGAGAGTTGGTAGAAACAGCTTTTATTACCAATGGCAAGGAAGGTTGTTTAGTTGTTAAGGATAAACAAATTAC
TTCCGTACCTGGGTTTAATGCAACGGCGATCGATACTGTTGGTGCAGGAGATGCTTTTGCTGGAGGTGTGTTATATGGTC
TTACTCATGGTTATGAACCTACTCAAGCTGCACGTTGGGGAAATTATCTAGCTTCTAACGTTGTACAAATTCAAGGTCCA
CGTTTAGAAGGGTCTTGGGCCGATAAAGTTCAACAAATAATTAATGCCTAA

Upstream 100 bases:

>100_bases
ATGCTAGGGAATCCCGCGCTGTCTCAAGTATAGCAGCGTCGGGAGGATGTCAAGAATAGGACATGATATTATCCTAGACG
GCTAAATAATAGAAAAATAA

Downstream 100 bases:

>100_bases
TTTCTCATTCACTTTTTGATATAGTCACCGACGGTCGACGGTCGACAATTAAACAGACACGGAGCAGTTATAGTCATTCT
GGTGATTAATTGAGACAAGT

Product: PfkB

Products: ADP; D-ribose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTAVNTQKLDVYGVGNALVDILALVEEDFITKFSLQKSGMTLMDAQKQGGILAGLKDISLKKRSGGSAANSMIALAQSGG
TGIFVAKVASDPNGELYRQDMLNFKMDFNVPPAPTADNPTGTCVVLTTPDAERTMCTNLGVSVNLSVSDIDVEQIKRCKY
SYVEGYLWTGDSTKEACKQAMQYSKDEKVKVCFTFSDQFLVDMFADEFRSLLLDYCDVLFCNADEARSFCKKDSLDDSAK
SIGELVETAFITNGKEGCLVVKDKQITSVPGFNATAIDTVGAGDAFAGGVLYGLTHGYEPTQAARWGNYLASNVVQIQGP
RLEGSWADKVQQIINA

Sequences:

>Translated_336_residues
MTAVNTQKLDVYGVGNALVDILALVEEDFITKFSLQKSGMTLMDAQKQGGILAGLKDISLKKRSGGSAANSMIALAQSGG
TGIFVAKVASDPNGELYRQDMLNFKMDFNVPPAPTADNPTGTCVVLTTPDAERTMCTNLGVSVNLSVSDIDVEQIKRCKY
SYVEGYLWTGDSTKEACKQAMQYSKDEKVKVCFTFSDQFLVDMFADEFRSLLLDYCDVLFCNADEARSFCKKDSLDDSAK
SIGELVETAFITNGKEGCLVVKDKQITSVPGFNATAIDTVGAGDAFAGGVLYGLTHGYEPTQAARWGNYLASNVVQIQGP
RLEGSWADKVQQIINA
>Mature_335_residues
TAVNTQKLDVYGVGNALVDILALVEEDFITKFSLQKSGMTLMDAQKQGGILAGLKDISLKKRSGGSAANSMIALAQSGGT
GIFVAKVASDPNGELYRQDMLNFKMDFNVPPAPTADNPTGTCVVLTTPDAERTMCTNLGVSVNLSVSDIDVEQIKRCKYS
YVEGYLWTGDSTKEACKQAMQYSKDEKVKVCFTFSDQFLVDMFADEFRSLLLDYCDVLFCNADEARSFCKKDSLDDSAKS
IGELVETAFITNGKEGCLVVKDKQITSVPGFNATAIDTVGAGDAFAGGVLYGLTHGYEPTQAARWGNYLASNVVQIQGPR
LEGSWADKVQQIINA

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI32484973, Length=345, Percent_Identity=24.6376811594203, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI32484975, Length=335, Percent_Identity=24.1791044776119, Blast_Score=96, Evalue=3e-20,
Organism=Escherichia coli, GI87081971, Length=321, Percent_Identity=27.1028037383178, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790193, Length=236, Percent_Identity=25, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17541820, Length=330, Percent_Identity=24.2424242424242, Blast_Score=87, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6322565, Length=330, Percent_Identity=27.2727272727273, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24663633, Length=334, Percent_Identity=23.9520958083832, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21356339, Length=334, Percent_Identity=23.9520958083832, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355521, Length=331, Percent_Identity=25.0755287009063, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: 2.7.1.15

Molecular weight: Translated: 36266; Mature: 36135

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVNTQKLDVYGVGNALVDILALVEEDFITKFSLQKSGMTLMDAQKQGGILAGLKDISL
CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCEEEEHHHCEE
KKRSGGSAANSMIALAQSGGTGIFVAKVASDPNGELYRQDMLNFKMDFNVPPAPTADNPT
ECCCCCCHHHHEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCEEEECCCCCCCCCCCCC
GTCVVLTTPDAERTMCTNLGVSVNLSVSDIDVEQIKRCKYSYVEGYLWTGDSTKEACKQA
CEEEEEECCCCHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCEEECCCCHHHHHHHH
MQYSKDEKVKVCFTFSDQFLVDMFADEFRSLLLDYCDVLFCNADEARSFCKKDSLDDSAK
HHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCHHHH
SIGELVETAFITNGKEGCLVVKDKQITSVPGFNATAIDTVGAGDAFAGGVLYGLTHGYEP
HHHHHHHHHHHCCCCCCEEEEECCCEECCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCC
TQAARWGNYLASNVVQIQGPRLEGSWADKVQQIINA
CHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TAVNTQKLDVYGVGNALVDILALVEEDFITKFSLQKSGMTLMDAQKQGGILAGLKDISL
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCEEEEHHHCEE
KKRSGGSAANSMIALAQSGGTGIFVAKVASDPNGELYRQDMLNFKMDFNVPPAPTADNPT
ECCCCCCHHHHEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCEEEECCCCCCCCCCCCC
GTCVVLTTPDAERTMCTNLGVSVNLSVSDIDVEQIKRCKYSYVEGYLWTGDSTKEACKQA
CEEEEEECCCCHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCEEECCCCHHHHHHHH
MQYSKDEKVKVCFTFSDQFLVDMFADEFRSLLLDYCDVLFCNADEARSFCKKDSLDDSAK
HHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCHHHH
SIGELVETAFITNGKEGCLVVKDKQITSVPGFNATAIDTVGAGDAFAGGVLYGLTHGYEP
HHHHHHHHHHHCCCCCCEEEEECCCEECCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCC
TQAARWGNYLASNVVQIQGPRLEGSWADKVQQIINA
CHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-ribose

Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]