Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476789

Identifier: 113476789

GI number: 113476789

Start: 5008408

End: 5010945

Strand: Reverse

Name: 113476789

Synonym: Tery_3265

Alternate gene names: NA

Gene position: 5010945-5008408 (Counterclockwise)

Preceding gene: 113476790

Following gene: 113476785

Centisome position: 64.66

GC content: 33.85

Gene sequence:

>2538_bases
ATGAAGATCATAAAATTGCTCGCCATTACTCTATTAAGTTTCTGTATCACTGTGGGAATTAATGTTTTACCTCCCACTTT
AGCTGAATCTTCTGCCACTCATCTAGTTCAAGAAGGAACTCAATTATTACAACAAGGAAAGGCAGAAGCAGCATTAGAAA
TTTGGCAAAAAGCAGAGGAACTTTATCGCCAAAATCAAAATCAAACTGGTATTATCGGTACCAAAATTAATCAAGCTCAA
GCTTTAACCAGTTTGGGTTTTCATGAACGTTCGTGTAATACTGTCTTAAAAGCATTTGGCAATGATTTAGAATGCGCTCG
CTTAACTGAAAATGACTTAGAAAATGTTCTGGAAAAGTTTCAAACATCAAATACTAGCCTAAATTTTCAGGGGTTACAAA
TCTTAGGAAATGGACTGCTGGCGTTCGGTAAATTGGAGTTATCTGAAAAGGTATTAGAAGCAAGTTATAAGTGGGTAAAT
TCTAACAATACTAAAGCTCAATTGTTGATAAGTTTAGGTAACAATAGGCTTTCTCAAGCTCAAAATATTGCTGTCGATCG
TAGAAGTGGAAAAGATGAACGAGCGCTTCGAACCCTAGTTGATCAAAGTTTATCTAATTATCAAGAAGCTGCCAGTATTT
CTACTGACAAATCAGTTCAAATTCAAGGAACTATTAATAATCTTAGTTTGCTAGTCAAATTTACTAAAGAAATTGGTGAT
TTAGATACTTATGTACAATTTCAGATTGAAACTTTACCCGAAATTATTGATTTTTTAAATCAAATTAATCCTACTCCTAA
ATCAATTAGAGCCAGAATTAAATTAGCAGAAATTTTTACAAATATTGAGGAAATTAAAGATCAATCAGCTTTTGTTGAAT
TTCAAACTAATATTACTAAGTTAACTCCACCTAGCGAATTATTAAATCAGGCAATTGAAGAAGCAAAAGATATTAATAAT
TTCCGTTTAGAAGCTTATGGAATTGGTACCCAGGCAAAATTTAATATCAAAAAAGGAAACCTAGAAAAAGCACTTAAATT
GACAAATAAAGCATTATTGACTGCTCAAAAAGTATCTGCTTATGATATTGTTTATCAACTCCAAGAACAATTAGGAGATA
TTTTGATTAAGCAAGGAAATTATTCAGAGGCACTCTTGGCTGACAAATCTGCTTTTAATACTCTCCAAGTTTTACGACAG
GATTTAGTAGTATTAAATAGAGATATTCAGTTTAACTTTCGTGATAGTATTGAACCTTTGTATAGAAAATTGCTAGGCTT
ATTACTGCAACCTGAACTTGGCTTAAATCAACCCAATGTGGCAAATATTAAAGTTGCTGTTGAAGTAATTGAATCTCTAC
AATTAGCAGAATTGGATAATTTTTTCCAAGATGCTTGTGTGAGGGCTCAGGATATTAATTTTGATGAAATTGATCAGAAT
GCAGCTGTTATTTATCCAATCTTATTCGAGGATCGATTAAGTGTGATTCTCAAATTGCCTGGTACTGATAATTTTCGTTA
TGCTAGCTTCAGTGAGAGTAATTTTAAAGCCATCGATAGAGCCATAAATGGCAAAATTAATCAATATATCAAAGAACAAA
CTCCAATGGATCGTCGTATAGTCAAAGGGGGAAAGCGGGAGTTAAATAAACTTTATCAGTGGTTAATCAAACCTTTTGAA
GCATATTTGGAAATAGACGATGAATATGATACGAGTCAAATAAAAACCCTAGTTTTTGTCTTGGAAGGAGCACTTAGAAA
TATTCCTATGTCCGCTTTATATGATAGTGAACGGGAACGATATCTAGTGGAACGATACGCGATCGCTGTAGCTCCCAGTT
TGCAATTGCTTCCTCCAAAAGTATTATTAGAAGGTAAGTTACAAGTGTTAATTGCTGGAACAGATAAAAAAGCACCAAGT
TATGGTGAGAAATATAATCCTTTAAAAAATGTCAAACAGGAACTAGAGAGTATTAAGAAAATTATACCAAAGTCTGAGAC
ATTAGCAGATGAAAAATTCACGGCAATTAATATTCAAGACCAAATTAATTCTGTACCCTTTAACATTGTCCACATTGCAA
CTCACGGACAATTTAGCTCTAATATTGAGGAGACTGCTATTTTTGCATGGGATAAACCTATTAATGTTAAAGATTTTGAA
CAACTGCTCCAGAGTGAGAATTTGCAGCGATCGGATCGAGCTATAGAGTTATTAATTTTAAGTGCTTGTCAGACAGCTAT
TGGAGATCAACGAGCAGCATTGGGTTTAGCTGGATTTGCAGTTCGGGCAGGAGTTCGTAGTGTTTTAGGGAGTTTATGGA
GGGTAGATGATGCCTCGACAGCAGAGTTAATGAAACAATTTTATGAAGAATTATTGCAGTTGCAGTCTGATACTTCACAG
CAGTCTAATAGTTCAGAACTGAGAAAGGCAGAAGCACTACGTCAAGTTCAAATTAAGTTTATCAAAGGAGAAATTCAACC
AGAATACCAGCAACCTTATTATTGGTCACCATTTATTCTTGTTGGTAATTGGTTATAA

Upstream 100 bases:

>100_bases
TATGACACACCAGTTGAAAGTAGTTGAAAGTAGTTCCGAAAGTAGAACGAAGTGAAACCCAACACACCCTTTATTGTTTA
GATATTTATATCTATTTATT

Downstream 100 bases:

>100_bases
TAATACAGGGAAAAGGCGAGACTTTTGTGCCTCAGTATTCCACCAAACAACTTTGGTACTAAAAATACAACTTATCGCTC
CGCCAAAATGCCCTGACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; Haemagglutination Activity Domain Protein; Filamentous Haemagglutinin Outer Membrane Protein; Tetratricopeptide Repeat Family; Filamentous Hemagglutinin Family Outer Membrane Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Tetratricopeptide Region; WD-40 Repeat-Containing Protein; Tetratricopeptide Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Kinesin Light Chain; Tetratricopeptide Repeat-Containing Protein; Peptidase Domain-Containing Protein; Hemagglutination Activity Domain-Containing Protein; Peptidase Domain Protein; Peptidase-Like; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 845; Mature: 845

Protein sequence:

>845_residues
MKIIKLLAITLLSFCITVGINVLPPTLAESSATHLVQEGTQLLQQGKAEAALEIWQKAEELYRQNQNQTGIIGTKINQAQ
ALTSLGFHERSCNTVLKAFGNDLECARLTENDLENVLEKFQTSNTSLNFQGLQILGNGLLAFGKLELSEKVLEASYKWVN
SNNTKAQLLISLGNNRLSQAQNIAVDRRSGKDERALRTLVDQSLSNYQEAASISTDKSVQIQGTINNLSLLVKFTKEIGD
LDTYVQFQIETLPEIIDFLNQINPTPKSIRARIKLAEIFTNIEEIKDQSAFVEFQTNITKLTPPSELLNQAIEEAKDINN
FRLEAYGIGTQAKFNIKKGNLEKALKLTNKALLTAQKVSAYDIVYQLQEQLGDILIKQGNYSEALLADKSAFNTLQVLRQ
DLVVLNRDIQFNFRDSIEPLYRKLLGLLLQPELGLNQPNVANIKVAVEVIESLQLAELDNFFQDACVRAQDINFDEIDQN
AAVIYPILFEDRLSVILKLPGTDNFRYASFSESNFKAIDRAINGKINQYIKEQTPMDRRIVKGGKRELNKLYQWLIKPFE
AYLEIDDEYDTSQIKTLVFVLEGALRNIPMSALYDSERERYLVERYAIAVAPSLQLLPPKVLLEGKLQVLIAGTDKKAPS
YGEKYNPLKNVKQELESIKKIIPKSETLADEKFTAINIQDQINSVPFNIVHIATHGQFSSNIEETAIFAWDKPINVKDFE
QLLQSENLQRSDRAIELLILSACQTAIGDQRAALGLAGFAVRAGVRSVLGSLWRVDDASTAELMKQFYEELLQLQSDTSQ
QSNSSELRKAEALRQVQIKFIKGEIQPEYQQPYYWSPFILVGNWL

Sequences:

>Translated_845_residues
MKIIKLLAITLLSFCITVGINVLPPTLAESSATHLVQEGTQLLQQGKAEAALEIWQKAEELYRQNQNQTGIIGTKINQAQ
ALTSLGFHERSCNTVLKAFGNDLECARLTENDLENVLEKFQTSNTSLNFQGLQILGNGLLAFGKLELSEKVLEASYKWVN
SNNTKAQLLISLGNNRLSQAQNIAVDRRSGKDERALRTLVDQSLSNYQEAASISTDKSVQIQGTINNLSLLVKFTKEIGD
LDTYVQFQIETLPEIIDFLNQINPTPKSIRARIKLAEIFTNIEEIKDQSAFVEFQTNITKLTPPSELLNQAIEEAKDINN
FRLEAYGIGTQAKFNIKKGNLEKALKLTNKALLTAQKVSAYDIVYQLQEQLGDILIKQGNYSEALLADKSAFNTLQVLRQ
DLVVLNRDIQFNFRDSIEPLYRKLLGLLLQPELGLNQPNVANIKVAVEVIESLQLAELDNFFQDACVRAQDINFDEIDQN
AAVIYPILFEDRLSVILKLPGTDNFRYASFSESNFKAIDRAINGKINQYIKEQTPMDRRIVKGGKRELNKLYQWLIKPFE
AYLEIDDEYDTSQIKTLVFVLEGALRNIPMSALYDSERERYLVERYAIAVAPSLQLLPPKVLLEGKLQVLIAGTDKKAPS
YGEKYNPLKNVKQELESIKKIIPKSETLADEKFTAINIQDQINSVPFNIVHIATHGQFSSNIEETAIFAWDKPINVKDFE
QLLQSENLQRSDRAIELLILSACQTAIGDQRAALGLAGFAVRAGVRSVLGSLWRVDDASTAELMKQFYEELLQLQSDTSQ
QSNSSELRKAEALRQVQIKFIKGEIQPEYQQPYYWSPFILVGNWL
>Mature_845_residues
MKIIKLLAITLLSFCITVGINVLPPTLAESSATHLVQEGTQLLQQGKAEAALEIWQKAEELYRQNQNQTGIIGTKINQAQ
ALTSLGFHERSCNTVLKAFGNDLECARLTENDLENVLEKFQTSNTSLNFQGLQILGNGLLAFGKLELSEKVLEASYKWVN
SNNTKAQLLISLGNNRLSQAQNIAVDRRSGKDERALRTLVDQSLSNYQEAASISTDKSVQIQGTINNLSLLVKFTKEIGD
LDTYVQFQIETLPEIIDFLNQINPTPKSIRARIKLAEIFTNIEEIKDQSAFVEFQTNITKLTPPSELLNQAIEEAKDINN
FRLEAYGIGTQAKFNIKKGNLEKALKLTNKALLTAQKVSAYDIVYQLQEQLGDILIKQGNYSEALLADKSAFNTLQVLRQ
DLVVLNRDIQFNFRDSIEPLYRKLLGLLLQPELGLNQPNVANIKVAVEVIESLQLAELDNFFQDACVRAQDINFDEIDQN
AAVIYPILFEDRLSVILKLPGTDNFRYASFSESNFKAIDRAINGKINQYIKEQTPMDRRIVKGGKRELNKLYQWLIKPFE
AYLEIDDEYDTSQIKTLVFVLEGALRNIPMSALYDSERERYLVERYAIAVAPSLQLLPPKVLLEGKLQVLIAGTDKKAPS
YGEKYNPLKNVKQELESIKKIIPKSETLADEKFTAINIQDQINSVPFNIVHIATHGQFSSNIEETAIFAWDKPINVKDFE
QLLQSENLQRSDRAIELLILSACQTAIGDQRAALGLAGFAVRAGVRSVLGSLWRVDDASTAELMKQFYEELLQLQSDTSQ
QSNSSELRKAEALRQVQIKFIKGEIQPEYQQPYYWSPFILVGNWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95269; Mature: 95269

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKLLAITLLSFCITVGINVLPPTLAESSATHLVQEGTQLLQQGKAEAALEIWQKAEE
CHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LYRQNQNQTGIIGTKINQAQALTSLGFHERSCNTVLKAFGNDLECARLTENDLENVLEKF
HHHCCCCCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHH
QTSNTSLNFQGLQILGNGLLAFGKLELSEKVLEASYKWVNSNNTKAQLLISLGNNRLSQA
HCCCCCCCCCHHHHHCCCHHEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHH
QNIAVDRRSGKDERALRTLVDQSLSNYQEAASISTDKSVQIQGTINNLSLLVKFTKEIGD
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCC
LDTYVQFQIETLPEIIDFLNQINPTPKSIRARIKLAEIFTNIEEIKDQSAFVEFQTNITK
CHHHHEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCC
LTPPSELLNQAIEEAKDINNFRLEAYGIGTQAKFNIKKGNLEKALKLTNKALLTAQKVSA
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
YDIVYQLQEQLGDILIKQGNYSEALLADKSAFNTLQVLRQDLVVLNRDIQFNFRDSIEPL
HHHHHHHHHHHHHHEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHH
YRKLLGLLLQPELGLNQPNVANIKVAVEVIESLQLAELDNFFQDACVRAQDINFDEIDQN
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
AAVIYPILFEDRLSVILKLPGTDNFRYASFSESNFKAIDRAINGKINQYIKEQTPMDRRI
CEEEEEEEHHCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHH
VKGGKRELNKLYQWLIKPFEAYLEIDDEYDTSQIKTLVFVLEGALRNIPMSALYDSERER
HCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHH
YLVERYAIAVAPSLQLLPPKVLLEGKLQVLIAGTDKKAPSYGEKYNPLKNVKQELESIKK
HHHHHHHHHCCCCCCCCCCHHEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
IIPKSETLADEKFTAINIQDQINSVPFNIVHIATHGQFSSNIEETAIFAWDKPINVKDFE
HCCCCCCCCCCCEEEEEEHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHH
QLLQSENLQRSDRAIELLILSACQTAIGDQRAALGLAGFAVRAGVRSVLGSLWRVDDAST
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AELMKQFYEELLQLQSDTSQQSNSSELRKAEALRQVQIKFIKGEIQPEYQQPYYWSPFIL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCEEE
VGNWL
ECCCC
>Mature Secondary Structure
MKIIKLLAITLLSFCITVGINVLPPTLAESSATHLVQEGTQLLQQGKAEAALEIWQKAEE
CHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LYRQNQNQTGIIGTKINQAQALTSLGFHERSCNTVLKAFGNDLECARLTENDLENVLEKF
HHHCCCCCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHH
QTSNTSLNFQGLQILGNGLLAFGKLELSEKVLEASYKWVNSNNTKAQLLISLGNNRLSQA
HCCCCCCCCCHHHHHCCCHHEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHH
QNIAVDRRSGKDERALRTLVDQSLSNYQEAASISTDKSVQIQGTINNLSLLVKFTKEIGD
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCC
LDTYVQFQIETLPEIIDFLNQINPTPKSIRARIKLAEIFTNIEEIKDQSAFVEFQTNITK
CHHHHEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCC
LTPPSELLNQAIEEAKDINNFRLEAYGIGTQAKFNIKKGNLEKALKLTNKALLTAQKVSA
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
YDIVYQLQEQLGDILIKQGNYSEALLADKSAFNTLQVLRQDLVVLNRDIQFNFRDSIEPL
HHHHHHHHHHHHHHEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHH
YRKLLGLLLQPELGLNQPNVANIKVAVEVIESLQLAELDNFFQDACVRAQDINFDEIDQN
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
AAVIYPILFEDRLSVILKLPGTDNFRYASFSESNFKAIDRAINGKINQYIKEQTPMDRRI
CEEEEEEEHHCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHH
VKGGKRELNKLYQWLIKPFEAYLEIDDEYDTSQIKTLVFVLEGALRNIPMSALYDSERER
HCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHH
YLVERYAIAVAPSLQLLPPKVLLEGKLQVLIAGTDKKAPSYGEKYNPLKNVKQELESIKK
HHHHHHHHHCCCCCCCCCCHHEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
IIPKSETLADEKFTAINIQDQINSVPFNIVHIATHGQFSSNIEETAIFAWDKPINVKDFE
HCCCCCCCCCCCEEEEEEHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHH
QLLQSENLQRSDRAIELLILSACQTAIGDQRAALGLAGFAVRAGVRSVLGSLWRVDDAST
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AELMKQFYEELLQLQSDTSQQSNSSELRKAEALRQVQIKFIKGEIQPEYQQPYYWSPFIL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCEEE
VGNWL
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA