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The map label for this gene is yahD [C]

Identifier: 113476756

GI number: 113476756

Start: 4940563

End: 4940898

Strand: Reverse

Name: yahD [C]

Synonym: Tery_3227

Alternate gene names: 113476756

Gene position: 4940898-4940563 (Counterclockwise)

Preceding gene: 113476759

Following gene: 113476755

Centisome position: 63.75

GC content: 39.88

Gene sequence:

>336_bases
GTGAAAAAATTATTAGTTACTGGTTCAGATGTCAATGGCAATGACATTGATGGTTGGGTTCCTTTTATGGGTGCTGCTGC
TGGTGACAACCAGGAAATTTTGCAACTATTGTTAGATGTCGGTGCTGATATTAATGCTGCTACTAATTTTGGTATGACTG
CTTTGATGACTGCTGCTAGTAGTGGTCATGTTGGTATAGTGCAAACTTTACTAGAAAGGGAAGCAAATATTAGGGCAAAA
AATCACAACAAATGGACACCTTTCCTCTGGGTAGGTTCAGAAGGTCATAAAGATGTAGTGGAGTTGTTGAAGCAGATGCG
CGATCGTGATAATTAG

Upstream 100 bases:

>100_bases
AGTTGAAACTTTGCTAAGTGGGGGTGTGGATGTCAACGCTCAAGACTCAGAGGGTTCAACTGCTTGAATTGTTGCTGCTG
AAACTGGCCATGTAGAGATC

Downstream 100 bases:

>100_bases
TTATAGGAGTAAGGAAAAGTAAAGGGAGCCTGGGGAGTACAGGAGCTCGAAGATACACAAGCGGCATTAATAAAAATAGA
TTTTTCTCCCAGACCTCCCA

Product: ankyrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKKLLVTGSDVNGNDIDGWVPFMGAAAGDNQEILQLLLDVGADINAATNFGMTALMTAASSGHVGIVQTLLEREANIRAK
NHNKWTPFLWVGSEGHKDVVELLKQMRDRDN

Sequences:

>Translated_111_residues
MKKLLVTGSDVNGNDIDGWVPFMGAAAGDNQEILQLLLDVGADINAATNFGMTALMTAASSGHVGIVQTLLEREANIRAK
NHNKWTPFLWVGSEGHKDVVELLKQMRDRDN
>Mature_111_residues
MKKLLVTGSDVNGNDIDGWVPFMGAAAGDNQEILQLLLDVGADINAATNFGMTALMTAASSGHVGIVQTLLEREANIRAK
NHNKWTPFLWVGSEGHKDVVELLKQMRDRDN

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI38683816, Length=101, Percent_Identity=41.5841584158416, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI38683807, Length=101, Percent_Identity=41.5841584158416, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI55741641, Length=103, Percent_Identity=37.8640776699029, Blast_Score=67, Evalue=4e-12,
Organism=Homo sapiens, GI34304381, Length=92, Percent_Identity=40.2173913043478, Blast_Score=65, Evalue=9e-12,
Organism=Homo sapiens, GI70780355, Length=110, Percent_Identity=33.6363636363636, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI215598574, Length=110, Percent_Identity=33.6363636363636, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI268607595, Length=105, Percent_Identity=37.1428571428571, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI70780353, Length=110, Percent_Identity=33.6363636363636, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI70780359, Length=110, Percent_Identity=33.6363636363636, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI70780357, Length=110, Percent_Identity=33.6363636363636, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI34304379, Length=92, Percent_Identity=40.2173913043478, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI62988328, Length=105, Percent_Identity=39.0476190476191, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786511, Length=90, Percent_Identity=34.4444444444444, Blast_Score=62, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28573593, Length=105, Percent_Identity=36.1904761904762, Blast_Score=75, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281363919, Length=105, Percent_Identity=36.1904761904762, Blast_Score=75, Evalue=5e-15,
Organism=Drosophila melanogaster, GI45550479, Length=105, Percent_Identity=36.1904761904762, Blast_Score=75, Evalue=5e-15,
Organism=Drosophila melanogaster, GI45551135, Length=105, Percent_Identity=36.1904761904762, Blast_Score=75, Evalue=5e-15,
Organism=Drosophila melanogaster, GI221330476, Length=105, Percent_Identity=36.1904761904762, Blast_Score=75, Evalue=5e-15,
Organism=Drosophila melanogaster, GI221330480, Length=105, Percent_Identity=36.1904761904762, Blast_Score=75, Evalue=6e-15,
Organism=Drosophila melanogaster, GI221330478, Length=105, Percent_Identity=36.1904761904762, Blast_Score=75, Evalue=6e-15,
Organism=Drosophila melanogaster, GI221330482, Length=105, Percent_Identity=36.1904761904762, Blast_Score=75, Evalue=7e-15,
Organism=Drosophila melanogaster, GI221330474, Length=105, Percent_Identity=36.1904761904762, Blast_Score=75, Evalue=7e-15,
Organism=Drosophila melanogaster, GI281359521, Length=101, Percent_Identity=41.5841584158416, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281359519, Length=101, Percent_Identity=41.5841584158416, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28558752, Length=101, Percent_Identity=41.5841584158416, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28558750, Length=101, Percent_Identity=41.5841584158416, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28558756, Length=101, Percent_Identity=41.5841584158416, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28558754, Length=101, Percent_Identity=41.5841584158416, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581260, Length=103, Percent_Identity=33.9805825242718, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581258, Length=103, Percent_Identity=33.9805825242718, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28571867, Length=84, Percent_Identity=39.2857142857143, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571865, Length=84, Percent_Identity=39.2857142857143, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 12075; Mature: 12075

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLVTGSDVNGNDIDGWVPFMGAAAGDNQEILQLLLDVGADINAATNFGMTALMTAAS
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC
SGHVGIVQTLLEREANIRAKNHNKWTPFLWVGSEGHKDVVELLKQMRDRDN
CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLLVTGSDVNGNDIDGWVPFMGAAAGDNQEILQLLLDVGADINAATNFGMTALMTAAS
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC
SGHVGIVQTLLEREANIRAKNHNKWTPFLWVGSEGHKDVVELLKQMRDRDN
CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]