| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is mntA [H]
Identifier: 113476748
GI number: 113476748
Start: 4924188
End: 4925303
Strand: Reverse
Name: mntA [H]
Synonym: Tery_3218
Alternate gene names: 113476748
Gene position: 4925303-4924188 (Counterclockwise)
Preceding gene: 113476750
Following gene: 113476741
Centisome position: 63.55
GC content: 38.44
Gene sequence:
>1116_bases ATGAAAATTAGTAGATATCTGTTCCAAATTAATTTAACTAATAATGCAGTGAGAAAAGGCTTCACTCGGAACAGGAAACA GGAAATATATCTGAGTGGTAAATACACAAATAATTTGGCCTACCTGCTTAATATTTCTACTCAAGATTTGAAAAATACAA TTTGGTCAATGTTAGGAATTTTATTAGGATTATGGATAAGTGGTTGTGCTGCCCCATCTTCAAATATTTCCCCTGAGAGT GAGAATAAACTCTTAGTAGTCTCTACAAGTACGATCATTGCTGATATGACAGAAAAAATAGGTGGAGATGAAATTGAGCA TCAGGGAATTATTAAACCAGGGGCTGACCCTCATATTTATGAACCTGTTCCTACTGATAGTGTGGCTTTTGAGAAAGCAG ATTTAATTATTTATAATGGCTATAATTTGGAACCTACTTTAATTAAACTTATGAATGCTGCGGGTATAAAGGCTCAAAAG TTGGCGGTGGGGGAAAAGGTGAAGCCTTTACAAAATTTGGGTAAGGGGGAGTTAGTGCCAGATCCTCATGTTTGGGGTGA TGCGGAAAATGGAATTGTAATGGTGAAAGGTATTCGGGATGCTTTAATTGAGTTGTCACCGGAAGATAAAGAGGTGTTTA TGGAAAATGCTGCCAAATTAGTTGAGGAGTTAGGGCAGGTTGATATTTGGATCATGGAACAAATAGGAACTATTCCGGAA GGTCAGCGCCGACTGGTGACTACCCATGATGCTTTTGAGTATTATGCGAAAGCTTATGGTTTAGAGATGACTGGAACTTT GATTGGGATGAGTACGGAGGAGCAACCTAGTGCGCAGACTGTAAAAAATTTGGTGAAGGAAATTAAGAAAAGTGGAGTAC CTGCTATTTTTGCGGAGACTACTATTAATCCTAAGTTGATTACTACGGTAGCTCAGGAAGCTGGGGTACGGTTAGCTCCT AGGGAGTTATATTCTGATTCTATTGGGGCTCCAGGGAGTGAGGGAGATAGTTATACGAAAATGTTGGTGTCTAATACTCA GGCAATAGTTGAAGCTTTGGGTGGGGAATATACAGCTTTTGAGTTACAAATAACTGGAACTTTAGAAAAAAATTAA
Upstream 100 bases:
>100_bases ACCTCTCAAATTTTGACCCTGGAATATGAGAAATATGAAAGTAATATGATATAAATTATGAAAAGAATATGAAAAATTGT CAACTAAATCAAAATTAAAC
Downstream 100 bases:
>100_bases CTAAACTAGGTTAAAATTACTATATCTTGTGGCTTTAATAGACATCTCCAAAAATTATCAAGCATTTATTGTAACTATCT TTTGGGGAGCGATCGCCAGC
Product: periplasmic solute binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKISRYLFQINLTNNAVRKGFTRNRKQEIYLSGKYTNNLAYLLNISTQDLKNTIWSMLGILLGLWISGCAAPSSNISPES ENKLLVVSTSTIIADMTEKIGGDEIEHQGIIKPGADPHIYEPVPTDSVAFEKADLIIYNGYNLEPTLIKLMNAAGIKAQK LAVGEKVKPLQNLGKGELVPDPHVWGDAENGIVMVKGIRDALIELSPEDKEVFMENAAKLVEELGQVDIWIMEQIGTIPE GQRRLVTTHDAFEYYAKAYGLEMTGTLIGMSTEEQPSAQTVKNLVKEIKKSGVPAIFAETTINPKLITTVAQEAGVRLAP RELYSDSIGAPGSEGDSYTKMLVSNTQAIVEALGGEYTAFELQITGTLEKN
Sequences:
>Translated_371_residues MKISRYLFQINLTNNAVRKGFTRNRKQEIYLSGKYTNNLAYLLNISTQDLKNTIWSMLGILLGLWISGCAAPSSNISPES ENKLLVVSTSTIIADMTEKIGGDEIEHQGIIKPGADPHIYEPVPTDSVAFEKADLIIYNGYNLEPTLIKLMNAAGIKAQK LAVGEKVKPLQNLGKGELVPDPHVWGDAENGIVMVKGIRDALIELSPEDKEVFMENAAKLVEELGQVDIWIMEQIGTIPE GQRRLVTTHDAFEYYAKAYGLEMTGTLIGMSTEEQPSAQTVKNLVKEIKKSGVPAIFAETTINPKLITTVAQEAGVRLAP RELYSDSIGAPGSEGDSYTKMLVSNTQAIVEALGGEYTAFELQITGTLEKN >Mature_371_residues MKISRYLFQINLTNNAVRKGFTRNRKQEIYLSGKYTNNLAYLLNISTQDLKNTIWSMLGILLGLWISGCAAPSSNISPES ENKLLVVSTSTIIADMTEKIGGDEIEHQGIIKPGADPHIYEPVPTDSVAFEKADLIIYNGYNLEPTLIKLMNAAGIKAQK LAVGEKVKPLQNLGKGELVPDPHVWGDAENGIVMVKGIRDALIELSPEDKEVFMENAAKLVEELGQVDIWIMEQIGTIPE GQRRLVTTHDAFEYYAKAYGLEMTGTLIGMSTEEQPSAQTVKNLVKEIKKSGVPAIFAETTINPKLITTVAQEAGVRLAP RELYSDSIGAPGSEGDSYTKMLVSNTQAIVEALGGEYTAFELQITGTLEKN
Specific function: This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=253, Percent_Identity=22.9249011857708, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 40605; Mature: 40605
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISRYLFQINLTNNAVRKGFTRNRKQEIYLSGKYTNNLAYLLNISTQDLKNTIWSMLGI CCCEEEEEEEECCCHHHHHCCCCCCCEEEEEECEECCCEEEEEECCHHHHHHHHHHHHHH LLGLWISGCAAPSSNISPESENKLLVVSTSTIIADMTEKIGGDEIEHQGIIKPGADPHIY HHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC EPVPTDSVAFEKADLIIYNGYNLEPTLIKLMNAAGIKAQKLAVGEKVKPLQNLGKGELVP CCCCCCCCEEECCCEEEECCCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHCCCCCCCC DPHVWGDAENGIVMVKGIRDALIELSPEDKEVFMENAAKLVEELGQVDIWIMEQIGTIPE CCCCCCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCC GQRRLVTTHDAFEYYAKAYGLEMTGTLIGMSTEEQPSAQTVKNLVKEIKKSGVPAIFAET CCCEEEEEHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC TINPKLITTVAQEAGVRLAPRELYSDSIGAPGSEGDSYTKMLVSNTQAIVEALGGEYTAF CCCCHHHHHHHHHCCCEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE ELQITGTLEKN EEEEEEEECCC >Mature Secondary Structure MKISRYLFQINLTNNAVRKGFTRNRKQEIYLSGKYTNNLAYLLNISTQDLKNTIWSMLGI CCCEEEEEEEECCCHHHHHCCCCCCCEEEEEECEECCCEEEEEECCHHHHHHHHHHHHHH LLGLWISGCAAPSSNISPESENKLLVVSTSTIIADMTEKIGGDEIEHQGIIKPGADPHIY HHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC EPVPTDSVAFEKADLIIYNGYNLEPTLIKLMNAAGIKAQKLAVGEKVKPLQNLGKGELVP CCCCCCCCEEECCCEEEECCCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHCCCCCCCC DPHVWGDAENGIVMVKGIRDALIELSPEDKEVFMENAAKLVEELGQVDIWIMEQIGTIPE CCCCCCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCC GQRRLVTTHDAFEYYAKAYGLEMTGTLIGMSTEEQPSAQTVKNLVKEIKKSGVPAIFAET CCCEEEEEHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC TINPKLITTVAQEAGVRLAPRELYSDSIGAPGSEGDSYTKMLVSNTQAIVEALGGEYTAF CCCCHHHHHHHHHCCCEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE ELQITGTLEKN EEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]